ggKbase home page

SCNpilot_expt_1000_bf_scaffold_14658_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1..351)

Top 3 Functional Annotations

Value Algorithm Source
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FAV6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 117.0
  • Bit_score: 215
  • Evalue 2.90e-53
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:EHS50023.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 117.0
  • Bit_score: 215
  • Evalue 4.10e-53
biotin carboxylase (EC:6.3.4.14); K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.3.4.14] similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 117.0
  • Bit_score: 208
  • Evalue 8.60e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGAAGAAAGTGCTGATCGCCAATCGTGGCGAGATCGCCGTGCGCATCCTGCGCGCCTGCCGCGACCACGGCCTCCAGTCGGTCGCCGTCTATGCCGATCCGGATGCCGACGCGCTCTTCGTGCGCCTCGCCGATGAGGCCTACGGCCTCGATGGCGTGCGCCCGGCCGAGACCTATCTCGACATCGACAAGCTGATCGCCATCGCGAAACGCTCCGGCGCGGATGCCGTGCATCCCGGCTACGGCTTCCTCTCCGAGCGGTCGGAATTCGCGAAAGCCGTGCAGGATGCCGGCCTCATCCGGATCGGGCCCGACCCGCATGTGATCGAGGCGCTGGGCGACAAGGTCGAG
PROTEIN sequence
Length: 117
MKKVLIANRGEIAVRILRACRDHGLQSVAVYADPDADALFVRLADEAYGLDGVRPAETYLDIDKLIAIAKRSGADAVHPGYGFLSERSEFAKAVQDAGLIRIGPDPHVIEALGDKVE