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SCNpilot_expt_1000_bf_scaffold_14658_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(361..819)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETK4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 145.0
  • Bit_score: 262
  • Evalue 3.60e-67
Biotin-dependent carboxylase {ECO:0000313|EMBL:EYR78289.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 145.0
  • Bit_score: 262
  • Evalue 5.00e-67
putative allophanate hydrolase protein (EC:3.5.1.54) similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 144.0
  • Bit_score: 259
  • Evalue 9.50e-67

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
GTGCTGGCGCTCAGGGGCGGGGAGGGGCTTGCGAGCGTTTCCCTCGATGAGGCCCCGGCCTTCGACCTGCCGTCGGCGGGCGATGTCGTGACGCTCGACGTGGTGCTCGGGCCGCGCACGGACTGGTTCACGGAGAAGGGCATTGAGACGCTGACAAGCCAGCTCTGGCAGGTCACGCCGCAATCGAGCCGCGTCGGCATCCGCCTTGCCGGCGAGGTGCCGCTGGAGCGCAGGGACAGCGCGGAATTGCCGAGCGAAGGCACGGCGACCGGCGCGATCCAGGTGCCGCACAGCGGCCAGCCGGTGCTCTTCCTCGCCGACCATCCGCTGACCGGCGGCTACCCCGTCATCGGCGCGGTCGCCGAATACCATCTGGACCTTGCCGGCCAGATCCCCATCAATGCCAGGATCCGTTTCCGCCCGATCGGCCCCTNNNNNNNNNNNNNNNNNNNNNNNTAG
PROTEIN sequence
Length: 153
VLALRGGEGLASVSLDEAPAFDLPSAGDVVTLDVVLGPRTDWFTEKGIETLTSQLWQVTPQSSRVGIRLAGEVPLERRDSAELPSEGTATGAIQVPHSGQPVLFLADHPLTGGYPVIGAVAEYHLDLAGQIPINARIRFRPIGPXXXXXXXX*