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SCNpilot_expt_1000_bf_scaffold_14658_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(770..1948)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETK4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 288.0
  • Bit_score: 509
  • Evalue 2.50e-141
  • rbh
Biotin-dependent carboxylase {ECO:0000313|EMBL:EYR78289.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 288.0
  • Bit_score: 509
  • Evalue 3.50e-141
Biotin-dependent carboxylase-like protein similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 288.0
  • Bit_score: 488
  • Evalue 1.90e-135
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGGCGATCCCGACCGCCGCCACGCGTGAGGGCGCGATGCGCTTCCTACCCGTCAGCCTGACCACCATCCTCGTCGAGCTCGCCGATCTCGACGAGACGCTCGCGCTCTTCGCCTCGCTGCAGGCGGACCCGGTCGACGGCATCGAGGAGATGGTGCCGGCGGCGCGCACGCTGATGATCCGCTTCCGCCCGGAAAAGGTGACGTCCGCCGAGCTTGCCGCGCGGATCGCCACCCGCGACCTCTCGGCGAAGATCGCGCCCTCCGAGCACCTGGTGGAGATTCCCGTGCGTTATGACGGCGAGGACCTCGCCGACGTTGCGGAACTGGCGGGCCTCACAGTGGAAGAAGTCGTCCGCCGCCACACGGAGAGCGAATTCACCGTCGCCTTCTGCGGCTTCGCGCCGGGCTTCGGCTATCTCGTCGGCGGCGATCCGGCGCTGCATGTGCCGCGCCGCAAGAGCCCGCGCACCCGCATCCCGGCCGGCTCCGTGGCGCTTGCCGGCGCCTTCAGCGGCGTCTACCCGCAGGCAAGCCCTGGCGGCTGGCAGATCATCGGCACGACGCCCGTCATGATGTGGGACATCGACCGCGATCCCGGCGCGCTGTTCCAGCCCGGCTATCGCGTCCGCTTCTTCGACATGGAGCAGCCGGGCAGGACCGTCAGCATCCCGCAAGCCGCGCCCCGCAAGGAAAGCGCCGTCGCGCCGCAGGCGCCGCAGTTCAAGGTGCTTGCCGCGCCGATGCCGGCCGGCTTCCAGGACCTCGGCCGCTTCGGCCAGACGGGGCAGGGCGTTTCCGCCTCCGGCGCGCTCGACCGCGCCGCCTTCAATGCCGCCAACCGCATCGTCGGCAACCCGGCCAACACGCCGGTCCTCGAACTCACCCTCGGCGGCTTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCAGCCGCGATCTTGCGACCTACGAGCCGATCTCGCTGGAACCCGGCGACGTCGTGACCATCGGCCAGCCGAAGAAGGGCATGCGCGCCTATCTCGCCGTGCGCGGCGGCTTCGACATCGCCCCGGTTCTCGGCAGCGCCGCAACCGACACCCTCGCCGTCGTCGGCCCCGAGCCGGTGACGGCCGGGACCGTGCTGGCGCTCAGGGGCGGGGAGGGGCTTGCGAGCGTTTCCCTCGATGA
PROTEIN sequence
Length: 393
MAIPTAATREGAMRFLPVSLTTILVELADLDETLALFASLQADPVDGIEEMVPAARTLMIRFRPEKVTSAELAARIATRDLSAKIAPSEHLVEIPVRYDGEDLADVAELAGLTVEEVVRRHTESEFTVAFCGFAPGFGYLVGGDPALHVPRRKSPRTRIPAGSVALAGAFSGVYPQASPGGWQIIGTTPVMMWDIDRDPGALFQPGYRVRFFDMEQPGRTVSIPQAAPRKESAVAPQAPQFKVLAAPMPAGFQDLGRFGQTGQGVSASGALDRAAFNAANRIVGNPANTPVLELTLGGFXXXXXXXXXXXXXXQPRSCDLRADLAGTRRRRDHRPAEEGHARLSRRARRLRHRPGSRQRRNRHPRRRRPRAGDGRDRAGAQGRGGACERFPR*