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SCNpilot_expt_1000_bf_scaffold_7348_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 647..1360

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CD97_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 237.0
  • Bit_score: 437
  • Evalue 7.40e-120
  • rbh
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 237.0
  • Bit_score: 437
  • Evalue 1.00e-119
1-deoxy-D-xylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 237.0
  • Bit_score: 429
  • Evalue 8.30e-118
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
GTGGTGCACGACGTCGCCATCCAGGGCCTGCCGGTGCGCTTTCCCATCGACCGGGCCGGCTTCGTCGGCGCCGACGGGCCGACCCATGCCGGCTCCTTCGACACGACCTATCTCGCAACGCTGCCCGGCTTCGTGGTGATGGCCGCCGCCGACGAGGCGGAGCTGAAGCACATGGTGCGCACCGCCGCCGCCTATGGCGACGGCCCGATCTCCTTCCGCTATCCGCGCGGCGAAGGCGTCGGCGTCGAGATGCCGGCGCGCGGCGAGATCCTTCAGATCGGCAAGGGCCGCGTCGTCAAGCAGGGCTCCAAGGTGGCGCTGCTCTCCTTCGGCACCCGCCTTGCCGACTGTCTGCTTGCCGCCGAGGACCTCGACGCATCGGGACTTTCCACGACGGTTGCCGATGCGCGCTTCGCCAAGCCGCTCGACCGCGACCTCATCCGCCAGCTTGCCCGCAACCACGAGGTGCTGATCACCATCGAGGAAGGCGCCGTCGGCGGCTTCGCCAGCCATGTGCTGCAGTTCCTCGCGCTCGAAGGCCTGCTCGACCACGGCCTCAAGGTGCGCCCCATGGTGCTGCCCGATACCTGGATGGAACAGGCCAAGCCCGAGGCGATGTATGCCAGGGCCGGCCTCGACCGCGCCGGCATCGTCTCCACGGTGTTCCAGGCACTCGGCCAGAAAGCCGTCGCGGATGTGGGCGCGGCGGGCTGA
PROTEIN sequence
Length: 238
VVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYGDGPISFRYPRGEGVGVEMPARGEILQIGKGRVVKQGSKVALLSFGTRLADCLLAAEDLDASGLSTTVADARFAKPLDRDLIRQLARNHEVLITIEEGAVGGFASHVLQFLALEGLLDHGLKVRPMVLPDTWMEQAKPEAMYARAGLDRAGIVSTVFQALGQKAVADVGAAG*