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SCNpilot_expt_1000_bf_scaffold_7348_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3550..3975)

Top 3 Functional Annotations

Value Algorithm Source
Plasmid stability protein StbB {ECO:0000313|EMBL:BAR63234.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 137.0
  • Bit_score: 234
  • Evalue 8.00e-59
PilT protein n=1 Tax=mine drainage metagenome RepID=T0ZPP9_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 138.0
  • Bit_score: 218
  • Evalue 5.50e-54
stbB; plasmid stability protein StbB; K07062 similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 142.0
  • Bit_score: 215
  • Evalue 1.10e-53

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Taxonomy

Bradyrhizobium diazoefficiens → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
ATGTTCCTGCTCGATACGAATGTCATTTCCGAATTGCGCAAGGCGGGCGGTGGAAAAGCGGATCCGAACGTCGTCGCCTGGCTGGCCGGCCAGGACGCGTCGACGTGCTATGTTTCGGCGATCACTCTCATGGAGCTGGATCTCGGAATCCTGCTGATGGAGCGACGTGATCCTGCCCAGGGCGCTCGCTTGCGCACCTGGATGGCGGATTACGTTCTTCCGGAGTTTTCGGAACGCACCATTCCTATCGAACGGGCCGTTGCACTGGCCTGCGCACGACTGCATGTGCCCGATCCCCGGCCAGAACGGGACGCATTCATCGCCGCAAGCGCTCTCGTCCACGGGATGACGCTCGTGACGCGGAACGTGGCGGATTTCACGCCCATGGGCGTTACCATCGTCAATCCATGGGACGAGCCCGCATGA
PROTEIN sequence
Length: 142
MFLLDTNVISELRKAGGGKADPNVVAWLAGQDASTCYVSAITLMELDLGILLMERRDPAQGARLRTWMADYVLPEFSERTIPIERAVALACARLHVPDPRPERDAFIAASALVHGMTLVTRNVADFTPMGVTIVNPWDEPA*