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SCNpilot_expt_1000_bf_scaffold_8110_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 7392..7601

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY43_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 68.0
  • Bit_score: 119
  • Evalue 1.30e-24
ABC transporter-like protein {ECO:0000313|EMBL:EYR80901.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 68.0
  • Bit_score: 119
  • Evalue 1.80e-24
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 62.0
  • Bit_score: 106
  • Evalue 4.70e-21

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGAACAGCATGGCCCCATCCGATACCGTCGTTGCAGCAAGAGACCTCGGCCTGACGTTCCAGACGGCCGATGGGCCCGTCACGGCCCTGACCGGCGTCGACCTTTCCGTGGAGAAGGGCGATTTCGTCTCCTTCATCGGGCCGTCCGGCTGCGGCAAGACGACGTTCCTGCGCGTCATCGCCGACCTCGAAAAGCCGAAAAGCCGACAT
PROTEIN sequence
Length: 70
MNSMAPSDTVVAARDLGLTFQTADGPVTALTGVDLSVEKGDFVSFIGPSGCGKTTFLRVIADLEKPKSRH