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SCNpilot_expt_1000_bf_scaffold_11580_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1212..2375)

Top 3 Functional Annotations

Value Algorithm Source
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 389.0
  • Bit_score: 648
  • Evalue 6.30e-183
Alanine racemase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QTC2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 364.0
  • Bit_score: 489
  • Evalue 2.70e-135
  • rbh
alr; alanine racemase (EC:5.1.1.1) similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 365.0
  • Bit_score: 484
  • Evalue 3.50e-134
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGAGCCCGCACCATTCCCATGCACGTTCCAGCCTGCCGATCGCCGGCGAGGATCACGCCCGCCTGACGATCGACCTCTCCGCACTTGCCGACAACTGGCGGGCGATGGTCCGGCGTTCCGGCGCGGCGCGCACGGCCGCCGTGCTCAAGGCCGACGGCTACGGCATCGGCCTTGAGCATGCCGGGCGGACATTCCATCATGCGGGTGCCCGCGATTTCTTCGTCGCCACGCCGGCGGAAGGCGCGACGCTGCGCGCCATCCTGCCGGATGTCCGTATCTACGTCCTCTCCGGCATGTGGGCCGGCTCGGAACGCCTCTTCTTCGAATTCGACCTCGTGCCCGTCATCGTCTCGGAAGAACAGCTCGTCGTCTTCATGGCGGCGGTTTCCGATGGGCGCGACCATCCCTGCGTGCTGCATGTCGATACGGGCATGAACCGGCTCGGCCTTCGGGTCGAGGACGCGCTGGCGCTGGCCAACGACGCCGCGCGGCCGGCAAGCTTCTCGCCGATCATGCTGCTCAGCCACCTCGCCTGCGCCGACGAGCCGGCCCATCCGCTCAACCGCCAGCAGTTGCAGCGCTTCCGCGCCGTCGTCGAGGCCTTCGACGACATCGACGCCAGCCTTGCCAATTCGGCGGGCATCTTCCCCGGCGAGGACTATCACTTCCCCCTCCCCCGCCCCGGCATCGCGCTTTATGGCGGCAGCGCCGTCAACGGCTTGGAAACCCCGATGAAACCGGTCGTCACCGCCGAGGCGCGCATCCTCCAGGTGCGCGAGGCGAAGGCCGGCGAGAGCGTGAGCTACGGCGCGACGCCGCTGGCCCGCGACAGCCGCATCGCCATCGCCGCCATCGGCTATGCGGACGGCTACATGCGCACGCTCGGCGCCGGCGTGCCGCTGCGCGCGGCCGGCATTCCCGCCGCGAGCGGCGTGCTGCACGGGCGCACCGTGCCGCTGATCGGCCGCGTCACCATGGACCTCACCCATTTCGACGTCACCGACCTGCCGCCCGGCAGCGTGCGGGCCGGCGACTTCATAGAACTCTTCGGGCGCGCCATGCCGATCCAGGATGTCGCGCGCGCCGCCGGCACCGTCGACTACGAACTCCTCACCAGCCTCGGCAACCGCTACGAGCGGCGATACGAGGCGGTGAAAAAATAG
PROTEIN sequence
Length: 388
MSPHHSHARSSLPIAGEDHARLTIDLSALADNWRAMVRRSGAARTAAVLKADGYGIGLEHAGRTFHHAGARDFFVATPAEGATLRAILPDVRIYVLSGMWAGSERLFFEFDLVPVIVSEEQLVVFMAAVSDGRDHPCVLHVDTGMNRLGLRVEDALALANDAARPASFSPIMLLSHLACADEPAHPLNRQQLQRFRAVVEAFDDIDASLANSAGIFPGEDYHFPLPRPGIALYGGSAVNGLETPMKPVVTAEARILQVREAKAGESVSYGATPLARDSRIAIAAIGYADGYMRTLGAGVPLRAAGIPAASGVLHGRTVPLIGRVTMDLTHFDVTDLPPGSVRAGDFIELFGRAMPIQDVARAAGTVDYELLTSLGNRYERRYEAVKK*