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SCNpilot_expt_1000_bf_scaffold_11580_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11580_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1143)
DNA (1143bp) protein (381aa)
DNA repair protein RadA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EMG6_9RHIZ rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
radA; DNA repair protein (DNA repair protein) rbh
SCNpilot_expt_1000_bf_scaffold_11580_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1212..2375)
DNA (1164bp) protein (388aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Alanine racemase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QTC2_9RHIZ rbh
alr; alanine racemase (EC:5.1.1.1) rbh
SCNpilot_expt_1000_bf_scaffold_11580_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2478..3080
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQY6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78827.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_11580_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3142..3564)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTA1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78820.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_11580_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3889..4341
DNA (453bp) protein (151aa)
30S ribosomal protein S6 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQT5_9RHIZ rbh
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
SCNpilot_expt_1000_bf_scaffold_11580_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4366..4614
DNA (249bp) protein (83aa)
30S ribosomal protein S18 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C7Y8_9RHIZ
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
SCNpilot_expt_1000_bf_scaffold_11580_curated_7
unknown

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comp(4792..5490)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11580_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5817..5963
DNA (147bp) protein (49aa)
50S ribosomal protein L9 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXV7_9RHIZ
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rplI; 50S ribosomal protein L9
Displaying 8 items

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