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SCNpilot_expt_1000_bf_scaffold_1661_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5049..5597)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator PuuR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2D1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 182.0
  • Bit_score: 353
  • Evalue 1.40e-94
  • rbh
HTH-type transcriptional regulator PuuR {ECO:0000313|EMBL:EYR82980.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 182.0
  • Bit_score: 353
  • Evalue 2.00e-94
transcriptional regulator, XRE family with cupin sensor similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 182.0
  • Bit_score: 352
  • Evalue 7.60e-95
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGTCGGTCGATATCGGAGGCAGGCTGCGCCATCTGCGCATGGCCCACAATCTCTCCCAGCGGGAACTGGCCAAGCGCGCCGGCGTCACCAATTCGACCATCTCGCTGATCGAATCGAATGCCTCGAACCCGTCGGTCGGCGCCCTCAAGCGCATTCTCGACGGCATCCCGATCGGCCTTGCGGAATTCTTCGCCTTCGAGCCAGACCGCCCGCGAAAGGCGTTCTACCGGGCGGATGAGCTGACGGAGATCGGCAAGGGCGGCATTTCCTACCGCCAGATCGGCGATAACCTGTTCGGCCGCAGCCTGCAGATATTGAAGGAGTGCTACCAGCCCGGCGCCGACACCGGAAAGGTGCCGCTGGTGCATGACGGGGAGGAGGGCGGCATCGTGCTGTCCGGCCGCCTCGAAGTGACGGTCGACGACGAGCGCCGCATCCTCGGCCCGGGCGATGCCTACTATTTCGAAAGCCGCCGTCCGCACCGCTTCCGCTGCGTCGGCCCGGTGCCCTGCGAGGTCATCAGCGCCTGCACCCCGCCAACCTTCTGA
PROTEIN sequence
Length: 183
MSVDIGGRLRHLRMAHNLSQRELAKRAGVTNSTISLIESNASNPSVGALKRILDGIPIGLAEFFAFEPDRPRKAFYRADELTEIGKGGISYRQIGDNLFGRSLQILKECYQPGADTGKVPLVHDGEEGGIVLSGRLEVTVDDERRILGPGDAYYFESRRPHRFRCVGPVPCEVISACTPPTF*