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SCNpilot_expt_1000_bf_scaffold_1661_curated_19

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 17273..17425

Top 3 Functional Annotations

Value Algorithm Source
Putative sensory transducer protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDE9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 52.0
  • Bit_score: 87
  • Evalue 3.10e-15
Methyl-accepting chemotaxis citrate transducer {ECO:0000313|EMBL:EYR82969.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 52.0
  • Bit_score: 87
  • Evalue 4.30e-15
mcpB; methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 56.0
  • Bit_score: 66
  • Evalue 2.30e-09

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 153
ATGGCCGCTCCCGCCGCCAAGCGTCCGGCCGCAAGCCCTGCCCATCGCCCCGCGCCGGCAAGCGCCAAGGCGGCGCGCGGCAACGGCTTTGCCCTCGACATGTCGATGGGCGGCCCGGATGCCGACGACGCGGACTTCAGGGAAAGCGCCTGA
PROTEIN sequence
Length: 51
MAAPAAKRPAASPAHRPAPASAKAARGNGFALDMSMGGPDADDADFRESA*