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SCNpilot_expt_1000_bf_scaffold_10213_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2651..3097

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator NsrR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC50_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 148.0
  • Bit_score: 261
  • Evalue 4.60e-67
Transcriptional regulator BadM/Rrf2 family {ECO:0000313|EMBL:EYR81699.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 148.0
  • Bit_score: 261
  • Evalue 6.40e-67
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 143.0
  • Bit_score: 153
  • Evalue 7.20e-35

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGCGGATGACGCTTCACACCGACTATGCCCTGCGCATGCTGATCTACGTGGCGACGCGCCCGGACGGGGCCTGTACGGTCAACGACGTGGCGGAAGCCTACAAGCTTTCGCGCAACCACCTCCTGAAGGTGGCGCAGACCCTGCGCGACCTCGGCCTCGTCGAGACCACGCGTGGCCGCGCCGGCGGTATCCGGCTTGCAAGGCCCCCGCAGGAGATCGCCGTCGGCGCCCTCGTCAGGGCGACGGAAGAGGAATTCTCGCTCGCCGAATGCATGCAGGCCGGGGGTCGCCCCTGCGCGATCTCGCCGTCCTGCCGGCTCAAGGGCATGCTGCACGAGGCGCTCGGCGCCTTCCTGGCCGTGCTCGACAAATACACACTGGCCGACATCGTGCGGAACCGGGCGGCGCTCGGTCCGCTGCTCGGCATCGACGCCACGGCGGCGTGA
PROTEIN sequence
Length: 149
MRMTLHTDYALRMLIYVATRPDGACTVNDVAEAYKLSRNHLLKVAQTLRDLGLVETTRGRAGGIRLARPPQEIAVGALVRATEEEFSLAECMQAGGRPCAISPSCRLKGMLHEALGAFLAVLDKYTLADIVRNRAALGPLLGIDATAA*