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SCNpilot_expt_1000_bf_scaffold_10213_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10213_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(487..1329)
DNA (843bp) protein (281aa)
Nitrate reductase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EV99_9RHIZ
Nitrate reductase {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461}; EC=1.7.99.4 {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461};; Flags: Precursor;; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
napA; nitrate reductase catalytic subunit; K02567 periplasmic nitrate reductase NapA [EC:1.7.99.4]
SCNpilot_expt_1000_bf_scaffold_10213_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1304..1588)
DNA (285bp) protein (95aa)
Periplasmic nitrate reductase, NapD protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY38_9RHIZ
Periplasmic nitrate reductase, NapD protein {ECO:0000313|EMBL:EYR82569.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10213_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1581..2078)
DNA (498bp) protein (166aa)
Ferredoxin-type protein NapF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2Q4_9RHIZ
Ferredoxin-type protein NapF {ECO:0000313|EMBL:EYR82568.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
napF; periplasmic nitrate reductase, ferredoxin-like protein; K02572 ferredoxin-type protein NapF
SCNpilot_expt_1000_bf_scaffold_10213_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2089..2280)
DNA (192bp) protein (64aa)
Periplasmic nitrate reductase subunit NapE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTP8_9RHIZ
Periplasmic nitrate reductase subunit NapE {ECO:0000313|EMBL:EYR82567.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
napE; NapE component of periplasmic nitrate reductase; K02571 periplasmic nitrate reductase NapE
SCNpilot_expt_1000_bf_scaffold_10213_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2651..3097
DNA (447bp) protein (149aa)
HTH-type transcriptional regulator NsrR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC50_9RHIZ
Transcriptional regulator BadM/Rrf2 family {ECO:0000313|EMBL:EYR81699.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
SCNpilot_expt_1000_bf_scaffold_10213_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3115..3219
DNA (105bp) protein (35aa)
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:EYR81700.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EYR81700.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Displaying 6 items

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