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SCNpilot_expt_1000_bf_scaffold_11619_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3..191

Top 3 Functional Annotations

Value Algorithm Source
Pilus assembly secretion protein n=1 Tax=Rhizobium sp. RepID=L0NLF2_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 63.0
  • Bit_score: 95
  • Evalue 1.80e-17
Pilus assembly secretion protein {ECO:0000313|EMBL:CCF21905.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 63.0
  • Bit_score: 95
  • Evalue 2.60e-17
ctpD; type IV pilus protein; K02280 pilus assembly protein CpaC similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 62.0
  • Bit_score: 92
  • Evalue 4.90e-17

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Taxonomy

Rhizobium sp. → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
GTGATCATCGCCACGCCCTATCTGGTCAAGCCGGTGAGCCGGAACGCGCTGGCGCGGCCTGACGACAATTTCAACCCGGTCAACGATGCCGCCAGCGTCTTCCTTGGCCAGGTCAACCAGATTTACGGCAGCAAGAACGCACTGCCCGCCCAGCGCTACGAAGGCAGCGTCGGGTTCATCTACAAGTGA
PROTEIN sequence
Length: 63
VIIATPYLVKPVSRNALARPDDNFNPVNDAASVFLGQVNQIYGSKNALPAQRYEGSVGFIYK*