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SCNpilot_expt_1000_bf_scaffold_6287_curated_22

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 14935..16074

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c-type biogenesis protein CycH n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDU5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 378.0
  • Bit_score: 604
  • Evalue 9.50e-170
  • rbh
Cytochrome c-type biogenesis protein CycH {ECO:0000313|EMBL:EYR81180.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 378.0
  • Bit_score: 604
  • Evalue 1.30e-169
cycH; cytochrome c-type biogenesis protein CycH; K02200 cytochrome c-type biogenesis protein CcmH similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 381.0
  • Bit_score: 447
  • Evalue 4.70e-123
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
ATGTTCTTCTGGATTCTCGTCGCCATACTGACGGCCGCCGTCGCCGTCGTCCTGCTCCTTCCGCTGCTGCGGCGCCCTCCTGCGGCCGCAGACGACACCGGCCACGACGTGGAGGTCTACCGCGACCAGCTCGAGGAGCTGAAGCGCGACGAGGCGTCGGGCCTCATCGGCACCAATGAGGCCGAGCTTGCCCGCGCGGAAGTCGCGCGCCGGCTGATCGCCGCCAGCAATGCCGAAAAGAACGAGCGCGCAAGCCCGGCGAGCCGTCGCAACCGGCTGGCGCAGGCCTTCGTGATCGTGCTCCTGCCCGCCATCGGGCTCTGTCTTTATCTTGCGACCGGCCGGCCGGATCTTCCGGCCCAGCCGCTCGCCGAGCGCCTTGCCAATCCCGGAACCGACATCAGCATCCTCATCGCGCGGGCGGAGAACCACCTGGCGCAGAATCCAGACGACGGGGAGGGCTGGGATCTTCTCGCGCCGATCTACTATCGCAACGGCCGGATGGAGGATGCGGCGAACGCCTACGCCCAGGCCATCCGCATTCTCGGCCCGACCACGGACCGTCTCGACGGCCAGGCGGAAACGCAGATCGCTCTGGCGAACGGCATCATCACCGCGGATGCCCGAAAGCTCCTGGAACAGTCCCTCGCACTACAGCCGGGCAATCCGCGCGCCGGCTACTATCTGGCGCTGGCTTTGGAGCAGGAAGGCAAGCCGGAGGAGGCCCGGGCAGCCTTCGAGGCGCTGGTTCAGAAAGCGCCGGCCGATGCCCCCTGGCTGCCGCTCGTCAAGGAGCGCATCGCAGCCCTTTCGCAAGGGCAGGGCAGCGTTGCGGCGGGCCAGCTCGGCAATCCGACGGCGGACGACGTGGCGGCCGCCCAGGACATGTCGGCCGGCGACCGCCGGCAGATGATCGGCGGCATGGTCGAGAGCCTTGCGGAAAAGCTTGCGGAAAATCCCGACAATTTCGAAGGGTGGATGCGCATCATCCGCTCCTATGTTGTGCTGGATCAAAGGCCGAAGGCCGAAGCGGCGCTAAAGACGGCCCTGGAAACCTTCCCGGCCGGCAGCGAGAACGGAAAGCAGCTTCTGGCGCTGGCACGGGATCTGTCGATTTCGGTTGAGGACAGCGGACAATGA
PROTEIN sequence
Length: 380
MFFWILVAILTAAVAVVLLLPLLRRPPAAADDTGHDVEVYRDQLEELKRDEASGLIGTNEAELARAEVARRLIAASNAEKNERASPASRRNRLAQAFVIVLLPAIGLCLYLATGRPDLPAQPLAERLANPGTDISILIARAENHLAQNPDDGEGWDLLAPIYYRNGRMEDAANAYAQAIRILGPTTDRLDGQAETQIALANGIITADARKLLEQSLALQPGNPRAGYYLALALEQEGKPEEARAAFEALVQKAPADAPWLPLVKERIAALSQGQGSVAAGQLGNPTADDVAAAQDMSAGDRRQMIGGMVESLAEKLAENPDNFEGWMRIIRSYVVLDQRPKAEAALKTALETFPAGSENGKQLLALARDLSISVEDSGQ*