name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_6287_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
329..637
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC78_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83856.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
conserved membrane protein of unknown function
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
725..1282
|
Phage prohead protease, HK97 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWS8_9RHIZ
rbh
Prohead peptidase {ECO:0000313|EMBL:EYR83855.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
gp35; phage prohead protease; K06904
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_3
unknown
|
Not on your lists |
comp(1279..1488)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1626..2519
|
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:EYR83854.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
capsid protein n=1 Tax=Rhizobium giardinii RepID=UPI0003604AC0
rbh
phage major capsid protein HK97 family
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2785..3354
|
Phage protein PhiE125 gp8 family {ECO:0000313|EMBL:EYR81164.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003601E18
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3354..3686
|
Phage head-tail adaptor, putative, SPP1 family {ECO:0000313|EMBL:EYR81165.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000374735E
phage head-tail adaptor
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3683..4090
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEI6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81166.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4118..4525
|
Phage major tail protein, TP901-1 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGP1_9RHIZ
Phage major tail protein, TP901-1 family {ECO:0000313|EMBL:EYR81167.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Phage major tail protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4525..4881
|
Uncharacterized protein {ECO:0000313|EMBL:EYR81168.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_10
unknown
|
Not on your lists |
4968..5081
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5085..5624
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCT8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81170.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5948..6556
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXD9_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR81171.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7062..7409
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EF93_9RHIZ
Phage protein {ECO:0000313|EMBL:EYR81172.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_14
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7843..8904
|
Gene transfer agent (GTA) orfg15, like protein {ECO:0000313|EMBL:CDN53228.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Uncharacterized protein (Fragment) n=1 Tax=Rhizobium sp. CF080 RepID=J2IHS3_9RHIZ
conserved exported protein of unknown function
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_15
unknown
|
Not on your lists |
comp(9658..9852)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_16
unknown
|
Not on your lists |
comp(9961..10629)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_17
Cleome spinosa, Cleome, Brassicales, rosids, Streptophyta, Viridiplantae
|
Not on your lists |
comp(10758..11411)
|
Prp9 n=1 Tax=Cleome spinosa RepID=B2BXP0_9ROSI
Prp9 {ECO:0000313|EMBL:ABW81077.1}; TaxID=228870 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Cleome.;" source="Cleome spinosa.;"
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11661..11867
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDV0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81175.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_19
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12297..12890
|
Virulence transcriptional regulatory protein PhoP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2T2_9RHIZ
rbh
Virulence transcriptional regulatory protein PhoP {ECO:0000313|EMBL:EYR81177.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
feuP; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12880..14298
|
Sensor protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY64_9RHIZ
rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
integral membrane sensor signal transduction histidine kinase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14288..14839
|
Putative outer-membrane lipoprotein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVC5_9RHIZ
Putative outer-membrane lipoprotein {ECO:0000313|EMBL:EYR81179.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
lipa1; 17 kDa surface antigen
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14935..16074
|
Cytochrome c-type biogenesis protein CycH n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDU5_9RHIZ
rbh
Cytochrome c-type biogenesis protein CycH {ECO:0000313|EMBL:EYR81180.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cycH; cytochrome c-type biogenesis protein CycH; K02200 cytochrome c-type biogenesis protein CcmH
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16071..16550
|
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTS0_9RHIZ
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Cytochrome c-type biogenesis protein ccmE; K02197 cytochrome c-type biogenesis protein CcmE
|
|
SCNpilot_expt_1000_bf_scaffold_6287_curated_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17057..17251
|
cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IUG6_RHOP2
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:ABD08144.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
|