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SCNpilot_expt_1000_bf_scaffold_8304_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 8014..9354

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:GAK72898.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 352.0
  • Bit_score: 346
  • Evalue 4.50e-92
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HTW4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 28.9
  • Coverage: 384.0
  • Bit_score: 162
  • Evalue 8.60e-37
lipopolysaccharide biosynthesis similarity KEGG
DB: KEGG
  • Identity: 27.5
  • Coverage: 375.0
  • Bit_score: 152
  • Evalue 2.80e-34

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
ATGGTCGACAGCAACATTTCACACGCCGAAAGAGAGGACGTGCAGAGCGCGGGCACCATTCCGCAGATCGATTTCGCGCATGTGTTTTCCGTCCTGCGCAACCGCTTCCTGATGATCGTCGCCCTCACGGCCCTTTTCTGCGTGGCATCCGTCTTCCTCTCGCAGCTCATGAAGAACTATTACGTCTCCACCGTCAGCATCCTGGTGGACCCGGAAGGCTCGCGGATCGTGGACGGCGAGATCAACGGCGAGAGCCGCGCCACGGAGGCGCGCACCCTCAACCAGCAATACATCCTGACCTCCGTGAAGGTCCTTTCCGCGGTGGTGGAATCGCAGGGCCTTGCCGACGACCCGGATTTCGGCGCGGCGCAACCCTATGAGCCCGACCGGGAGAAGCGCGCCCAGCGCGCGCTCGCCACGCTCCAGGGCGCGATCGCCGCCACGCTCAACAAGGCGAGCTTCGTCATCGACCTCTCCGTGACGTCGTACGATCCGGAAAAGGTCGCGCGGATCGCCAACGCGATCGCCGACACCTATATCCAGACCCGCCTCGAGATGAACAACGGGCTGGTGCGCCAGGCGACGACGGACCTTTCGGCCCAACTGGCGAGCCTGGAAAAGGCCGTCGAGGAAGGTGACCGCGCGATCCAGGCCTACAAGGCGGAACACAACCTCGTGGATGTCGCGGGCCGGCCGACCGCCGAGCAGCAGATCACCGACACCAATACCGAGATCACGCGCATTTCCGCGAGCATCGCGGAGAACGAGGCCCAGATCGCCGAGCTCGCCCGCGCGCGCTCCAACCCGGAATATCTGCGGTCGACGCCGGATTCCTCCCTGACGCCGGCGATCATCGAACTGCGCACGCGCTACCATACCGCGCTCGAGCAGCAGTCGGTGCTCCAGTCCTCCTTCGGCGAGCGCCATCCGTCCCTCATGAGCGCCAAGGCAAGAACGCGCGCGGTTTCCGCGCTTCTCGAAGGGCAGTTGAAGGACTTCACGACGGCGCTCGCCAGCAACGGCGAGAAGTTGAAGAACCAGCGCGAGCTGCTCCGCAAGAACCTTGCCGCGCTGAAGGGAAGCCTGAACGAGTCGGACCAGTCGATGGTTCGCCTGCGCGAGCTNNNNNNNNNNNNNNNCCAGCGACCGCGCGGTCTACGAATCCTTCCGGCTGCGCACCCGCCAGCTCTCCGGCCAGGAGCGCACGGTCAGCGAGAATCCGCAAATCATATCGGTCGCGCAGGTGCCGCTGACCAAGGCGGGCCCCAAGCGGTCCCTCATCATCGCCGGCGCGACGGTGCTCGGCCTGTTGCTCGGCTGCGGCATCGCGCTCGCCCGTGA
PROTEIN sequence
Length: 447
MVDSNISHAEREDVQSAGTIPQIDFAHVFSVLRNRFLMIVALTALFCVASVFLSQLMKNYYVSTVSILVDPEGSRIVDGEINGESRATEARTLNQQYILTSVKVLSAVVESQGLADDPDFGAAQPYEPDREKRAQRALATLQGAIAATLNKASFVIDLSVTSYDPEKVARIANAIADTYIQTRLEMNNGLVRQATTDLSAQLASLEKAVEEGDRAIQAYKAEHNLVDVAGRPTAEQQITDTNTEITRISASIAENEAQIAELARARSNPEYLRSTPDSSLTPAIIELRTRYHTALEQQSVLQSSFGERHPSLMSAKARTRAVSALLEGQLKDFTTALASNGEKLKNQRELLRKNLAALKGSLNESDQSMVRLREXXXXXXQRPRGLRILPAAHPPALRPGAHGQRESANHIGRAGAADQGGPQAVPHHRRRDGARPVARLRHRARP*