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SCNpilot_expt_1000_bf_scaffold_12633_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1360..2028)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHR8_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 218.0
  • Bit_score: 408
  • Evalue 5.90e-111
  • rbh
ABC transporter-like protein {ECO:0000313|EMBL:EGP54137.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 218.0
  • Bit_score: 408
  • Evalue 8.30e-111
artM; arginine transport ATP-binding protein ArtM similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 218.0
  • Bit_score: 399
  • Evalue 8.60e-109
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGAGGTGCTGTGCGGGATCGACGTNNNNNNNNNNNNTGCGCTGCCTCAACTATCTCGAAAAGCCGACGGGCGGCGCGATCTTCCTGCATGGCGAACCCGTCGGCGTGCGCTGGAAGGGCGACAGGCTCTACGAGATGAGCTTCAACGAGCTCGCCCGCCAGCGCCAGCGCATGGGCATGGTGTTCCAGGGCTTCCATCTCTTTCCGCACAAGACCGTGCTGGAGAACGTCATCGAGGCGCCGGTCCTCGTCAAGCGCGTGCCGCGGGCCGCGGCGGTCGAGGAGGCGATGGTGCTTCTGGACCGCGTCGGCATGAAGGAGCGGGCGGACTATTATCCCGCGCAGCTTTCCGGCGGCCAGCAGCAGCGCGCGGCGATTGCCCGCTCGCTGGCGATGAAGCCCGATGTCATGCTGTTCGACGAGCCGACCTCGGCGCTCGACCCCGAGCTTGTCGGCGAGGTCCTTGCCGTCATGCGCAAGCTTGCCGACGACGGCATGACCATGGTCGTCGTCACCCATGAAATGGGTTTTGCGCGCGACGTCGCCGACCACCTGATCTTCATGGACGGCGGGGTGATCGTCGAGCAGGGCCGGCCGGCCGACGTGCTGACGCGCCCGCAGCACGATCGTACGCGGGCGTTCCTGGCGCGCGTGCTGGCTGACGCGTGA
PROTEIN sequence
Length: 223
MRCCAGSTXXXXXRCLNYLEKPTGGAIFLHGEPVGVRWKGDRLYEMSFNELARQRQRMGMVFQGFHLFPHKTVLENVIEAPVLVKRVPRAAAVEEAMVLLDRVGMKERADYYPAQLSGGQQQRAAIARSLAMKPDVMLFDEPTSALDPELVGEVLAVMRKLADDGMTMVVVTHEMGFARDVADHLIFMDGGVIVEQGRPADVLTRPQHDRTRAFLARVLADA*