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SCNpilot_expt_1000_bf_scaffold_12633_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2095..3018)

Top 3 Functional Annotations

Value Algorithm Source
polar amino acid ABC transporter inner membrane subunit similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 307.0
  • Bit_score: 566
  • Evalue 5.60e-159
  • rbh
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PI45_RHIML similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 307.0
  • Bit_score: 566
  • Evalue 1.80e-158
  • rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABR64219.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 307.0
  • Bit_score: 565
  • Evalue 5.60e-158

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGTCTGAAAAACCACTCTCCCGCCCCTCGATCCACGATGTGAAGCCCATCGCGGTGCCGAAGATCGGCCACTGGATCGGCGGCGTGGCGCTTGCCGTTCTCGCGGTCGTCTTCCTGCAGGTGCTCGTCACCAACAAGAACATGCAATGGAGCGTGGTCGCCGAATACATGTTCAGCCGGCCGATCCTTTCGGGTCTCGGCATGACGCTGCTGCTGACGGTGCTTGCCATGGTGCTCGGCCTGGCGATCGGTGTCGTGCTTGCCATCATGCGCCTTTCGGCCAGCAGCGTCTTCCGGTCGGTAAGCTGGGGCTGGATCTGGTTCTTCCGCGGCGTGCCGCCGCTGGTGCAGATGATCTTCTGGTACAATCTCGCGCTGCTTCTGCCGGAAATCTCGATCGGCATCCCGTTCGACGGGCCGAAGCTTTTCTCATGGAATACCAACGCGCTCATCACGCCCTTCAGCGCGGCCATCATGGGCCTTGCCTTCACCGAGAGCGCCTATGCCGCCGAAATGATCCGCGCCGGCATCCAGGCGATCAATGCCGGCCAGACGGAAGCGGCCGCCACTCTGGGCATGACGCGCGGCCAGACGCTTCGCCGCATCGTGCTGCCGCAGGCGCTGCGCATCGTCATTCCGCCCATCGGCAACGACACGATCTCGATGCTGAAATTCACCTCGCTCGTCTCCGTGCTGGCGCTGCCCGACCTGCTCTATTCCGCGCAGATGGTCTATGCGCGCACCTACCAGACGGTGCCGCTGCTGCTGGTCGCGACCATCTGGTATCTCGTGCTCACCACCGTCCTGACGGTCGTCGAGCATGCCGTCGAGCACCGGTTGAAATCCGAACACCGCGCGGGTGCGAAGAAGGCGGGCGGATTTTTCCCCTTCCGCCTGTTCGCGCGCCAGCAGGAGGCCCTTTGA
PROTEIN sequence
Length: 308
MSEKPLSRPSIHDVKPIAVPKIGHWIGGVALAVLAVVFLQVLVTNKNMQWSVVAEYMFSRPILSGLGMTLLLTVLAMVLGLAIGVVLAIMRLSASSVFRSVSWGWIWFFRGVPPLVQMIFWYNLALLLPEISIGIPFDGPKLFSWNTNALITPFSAAIMGLAFTESAYAAEMIRAGIQAINAGQTEAAATLGMTRGQTLRRIVLPQALRIVIPPIGNDTISMLKFTSLVSVLALPDLLYSAQMVYARTYQTVPLLLVATIWYLVLTTVLTVVEHAVEHRLKSEHRAGAKKAGGFFPFRLFARQQEAL*