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SCNpilot_expt_1000_bf_scaffold_13097_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1400..2956)

Top 3 Functional Annotations

Value Algorithm Source
Putative formate dehydrogenase beta subunit n=1 Tax=Rhizobium sp. RepID=L0NJD5_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 518.0
  • Bit_score: 935
  • Evalue 2.50e-269
  • rbh
Putative formate dehydrogenase beta subunit {ECO:0000313|EMBL:CCF21193.1}; EC=1.2.1.2 {ECO:0000313|EMBL:CCF21193.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 518.0
  • Bit_score: 935
  • Evalue 3.50e-269
fdsB; NAD-dependent formate dehydrogenase subunit beta (EC:1.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 518.0
  • Bit_score: 896
  • Evalue 5.20e-258
  • rbh

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Taxonomy

Rhizobium sp. → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
ATGACCATCACCCTCTTCGTCCCGCGTGACGCTGCCGCCCTGGCGCTGGGCGCCGACCGTGTCGCCGCTGCCATTGCCCGCGAGATCGAGACCCGTGGCATCGACGCGCGCATCGTGCGCAACGGCTCGCGCGGCATGCACTGGCTGGAGCCGCTCGTCGAGGTGCGCACCGAACAGGGCCGCATCGCCTACGGCCCGGTGAAGCCCTCCGACGTCGCCTCGCTTTTCGATGCGGGGTTCCTGCAGGGCGGCGGCCATCCGCTCTGTCTCGGGCGAACGAAGGAAATCCCGTTCCTCGCCCGCCAGACGCGGCTGACCTTCGCCCGCTGCGGCGTCACCGACCCGCTCTCGCTCGAGGACTACCGGCATTACCAGGGCATGAAGGGCCTTGAGCGGGCCGTTGCGATGGAGCCCGCCGAGATCGTCAGGCAGGTGACCGATTCGGGTCTGCGCGGACGCGGCGGCGCAGGCTTTCCGACCGGCATCAAGTGGAAGACCGTGCTCGACGCCCCCGGCGCGCAGAAATACATCGTCTGCAATGCCGACGAGGGCGACAGCGGCACCTTCGCCGACCGCATGATCATGGAGGGTGACCCCTTCGTGCTGATCGAGGGCATGGCGATCGCCGGTCTCGCCACGGGCGCGACGAAGGGCTTCATCTACACCCGCTCCGAATATCCGCACGCCATCGAGACGATGAACGCCGCCGTGGAGATCGCCCGCAGGGCCGGCATCCTCGGCCCGTCGGTGCTGGGCTCCGGCAAGGCCTTCGACATGGAGGTGCGTGCCGGCGCCGGCGCCTATGTCTGCGGCGAGGAGACCGCCCTTCTCAACAGCCTGGAAGGCAAGCGCGGCATCGTGCGCGCCAAGCCGCCGCTCCCGGCGCTGCAGGGCTTCCTCGGCCGGCCGACCGTCGTCAACAACGTCATCTCGCTCGCCTCCGTGCCGATCATCATGGATCGCGGCGCCGAATTCTACCGCGACTTCGGCATGGGCCGCTCGCGCGGCACGATCCCGATCCAGATCGCCGGCAACGTCAGGCAGGGCGGCCTCTACGAGACCGCCTTCGGCCTGACGCTCGGCGAGATCGTCGACGACATCGGCGGCGGCACGGCGTCCGGCCGCCCGGTCCGCGCCGTGCAGGTCGGCGGCCCGCTCGGCGCCTATTTCCCCCGCGCGCTCTTCGATACGCCCTTCGACTACGAAGCCTTCGCGGCGAAGGACGGCCTCATCGGCCATGCCGGCATCACCGTCTTCGACGACACGGTCGACATGCTTAAGCAGGCGCGCTTCGCCATGGAATTCTGCGCCATCGAAAGCTGCGGCAAGTGCACGCCCTGCCGCATCGGCTCGACGCGCGGCGTCGAGACGGCCGACAACATCGCGCGCGGCATCGAGCCGGAGAAGAACCGCGAACTGCTGGCCGATCTCTGCAACACGATGAAATTCGGCTCGCTCTGCGCGCTCGGCGGCTTCACGCCCTATCCGGTCATGAGCGCGATGACGCATTTCCCCGAAGACTTTTCGCCGGCGCCCATCGCCGAAGCAGCGGAGTGA
PROTEIN sequence
Length: 519
MTITLFVPRDAAALALGADRVAAAIAREIETRGIDARIVRNGSRGMHWLEPLVEVRTEQGRIAYGPVKPSDVASLFDAGFLQGGGHPLCLGRTKEIPFLARQTRLTFARCGVTDPLSLEDYRHYQGMKGLERAVAMEPAEIVRQVTDSGLRGRGGAGFPTGIKWKTVLDAPGAQKYIVCNADEGDSGTFADRMIMEGDPFVLIEGMAIAGLATGATKGFIYTRSEYPHAIETMNAAVEIARRAGILGPSVLGSGKAFDMEVRAGAGAYVCGEETALLNSLEGKRGIVRAKPPLPALQGFLGRPTVVNNVISLASVPIIMDRGAEFYRDFGMGRSRGTIPIQIAGNVRQGGLYETAFGLTLGEIVDDIGGGTASGRPVRAVQVGGPLGAYFPRALFDTPFDYEAFAAKDGLIGHAGITVFDDTVDMLKQARFAMEFCAIESCGKCTPCRIGSTRGVETADNIARGIEPEKNRELLADLCNTMKFGSLCALGGFTPYPVMSAMTHFPEDFSPAPIAEAAE*