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SCNpilot_expt_1000_bf_scaffold_13097_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6514..7245

Top 3 Functional Annotations

Value Algorithm Source
Glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:EYR79622.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 253.0
  • Bit_score: 416
  • Evalue 3.30e-113
glpR; DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 255.0
  • Bit_score: 381
  • Evalue 2.00e-103
  • rbh
DeoR family transcriptional regulator n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AQ00_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 254.0
  • Bit_score: 381
  • Evalue 6.50e-103
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGTTTCTGACAGGTCGCCAGGCGGAGATCGTCGATCTCGCCAAGGCCGAGGGCCGCGTGCTCGTGGAGGACCTCGCGGCGCGGTTCTCCGTGACGCCCCAGACCATCCGCAAGGACCTCAACGATCTCTGCGACAACAAGGTGCTGACGCGCATCCATGGCGGCGCGCTGTTCCCGAGCGGCAACGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAATTCCTCGCTCTTCATCAATATCGGCACGACGACGGAGGCCGTCGGCGAGGCGCTGCTGGATCACAGGGAACTGATGGTCATCACCAACAACATCAACGTGGCCAACCGTTTGCGCGTCTATCCCTCGATAGAGGTCGTCATTGTCGGCGGTGTCGTGCGGGGTGCGGACGGCGGCATCGTCGGGGAGGCGGCGGTCGATTTCATCCGCCAGTTCAAGGTGGACTATGCGGTGATCGGCGTCTCGGCCATCGACGAGGACGGCGCGCTGCTCGATTTCGACTACCGCGAGGTGAAGGTCGCGCAGGCGATCATCGCCAATGCGCGTCACGTCATCCTGGTTTCGGATTCCACCAAATTCGAAAGGACCGCGCCGGTGCGCATCGGACATCTCTCGCAGGTCCACACTTTCATCACGGACCGCTGTCCTTCCGAGGGCATTCGCAGCATTTGCCAGGAGCATGACGTGCGTCTGGTCGAGACGGCGGTGCAGGCCTGA
PROTEIN sequence
Length: 244
MFLTGRQAEIVDLAKAEGRVLVEDLAARFSVTPQTIRKDLNDLCDNKVLTRIHGGALFPSGNEXXXXXXXXXXXXXXXNSSLFINIGTTTEAVGEALLDHRELMVITNNINVANRLRVYPSIEVVIVGGVVRGADGGIVGEAAVDFIRQFKVDYAVIGVSAIDEDGALLDFDYREVKVAQAIIANARHVILVSDSTKFERTAPVRIGHLSQVHTFITDRCPSEGIRSICQEHDVRLVETAVQA*