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SCNpilot_expt_1000_bf_scaffold_13097_curated_11

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 8921..10003

Top 3 Functional Annotations

Value Algorithm Source
sn-glycerol-3-phosphate import ATP-binding protein UgpC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHD2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 360.0
  • Bit_score: 668
  • Evalue 3.90e-189
  • rbh
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000313|EMBL:EYR79624.1}; EC=3.6.3.20 {ECO:0000313|EMBL:EYR79624.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 360.0
  • Bit_score: 668
  • Evalue 5.50e-189
putative ATP-binding protein of sugar ABC transporter; K02023 multiple sugar transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 356.0
  • Bit_score: 587
  • Evalue 2.10e-165
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGCTGGAACTGAGAAACATCACGAAGGTGGCGGGGGCGGAGACGCATATCCACCCGACCAACCTCGTGCTCGAGCGCGGCTCGCTCAACGTGCTGCTCGGCCCGACGCTGTCGGGCAAGACCTCGCTGATGCGCCTGATGGCCGGGCTCGACAAGCCGACATCCGGCTCCGTCTGGTTTGACGGCAAGGACGTGACGGGCGTGCGTGTGCAGGATCGCGGCGTCGCCATGGTCTACCAGCAGTTCATCAATTACCCGGCGATGACCGTCTACGAGAACATCGCCTCGCCGATGCGCATCAAGGGCGCGGATGCGGCGACCATCGACCGCGAAGTGCGCAAGGCGGCGGAGCTCCTGAAGCTGACGCCCTATCTCGACCGCACGCCGCTCAACCTTTCCGGCGGCCAGCAGCAGCGCACCGCGCTCGCCCGCGCCATCGTCAAGAATGCCAGCCTGGTGCTGCTCGACGAGCCGCTCGCCAATCTCGATTACAAGCTGCGCGAGGAGCTGCGGCTGGAGCTGCCGAAGATCTTTTCCGCCTCCGGCGCGATCTTCGTCTATGCGACGACCGAGCCTTCCGAAGCGCTGCTTCTCGGCGGCAACACGGCGACGCTGTCGGAAGGGCGCATCACCCAGTTCGGCCGCACCATCGACGTCTATCGCCGGCCGAACGACCTCCTGACCGCCCGCACCTTCGCCGATCCGCCGCTCAACACGATGCAGGTGGTGAAGACCGGCGGTCACTTCGAGCTCGGCGGCAAGCCGGTGCTGCCGGTGCCGGCGCATCTTTCCGCGCTGCCGGACGGTCCCTGCACCATCGCCTTCCAGCCGCATCATCTTTCGCTTTCCAGCCAGAGCCCAACCTCTGCGAGCCTCCAGGCGCGCACGGCGATTTCGGAGATCGCGGGCTCGGAGAGCTTCATCCACATCGAATTCGAGGGTACCCGCTGGGTCATGCTCGCGCCCGGCATCCACGACATCGAGCCGGACGCGGTCGTCACCGTCCATGTCGACACGCGCCATCTCATGGCGTTCGGCGCGGATGGCAGGGCGATGGCCGAGCCGGCCGCCGCGGCGGCGTGA
PROTEIN sequence
Length: 361
MLELRNITKVAGAETHIHPTNLVLERGSLNVLLGPTLSGKTSLMRLMAGLDKPTSGSVWFDGKDVTGVRVQDRGVAMVYQQFINYPAMTVYENIASPMRIKGADAATIDREVRKAAELLKLTPYLDRTPLNLSGGQQQRTALARAIVKNASLVLLDEPLANLDYKLREELRLELPKIFSASGAIFVYATTEPSEALLLGGNTATLSEGRITQFGRTIDVYRRPNDLLTARTFADPPLNTMQVVKTGGHFELGGKPVLPVPAHLSALPDGPCTIAFQPHHLSLSSQSPTSASLQARTAISEIAGSESFIHIEFEGTRWVMLAPGIHDIEPDAVVTVHVDTRHLMAFGADGRAMAEPAAAAA*