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SCNpilot_expt_1000_bf_scaffold_13097_curated_13

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(11185..11469)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Bordetella pertussis RepID=UPI00035ECAE3 similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 94.0
  • Bit_score: 77
  • Evalue 5.90e-12
Uncharacterised protein {ECO:0000313|EMBL:CRD74912.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 94.0
  • Bit_score: 77
  • Evalue 8.30e-12

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Taxonomy

Bordetella pertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGTCGACGCGGCCGAAGACCTGCCAGATCGTGCCGACCACGTTCCACGGAATGAGCAGCGGCAGCGCCATCAGCACGAGGCAGACCGGCACGCCGAGCCCCTTCTTCGGCATGTTGAGCGCGATCAGGATGCCGAGCGGAATCTCGATGACGAGGATGATCGCGGAAAAAAGCAGGTTGCGGCCGAGCGCTTCCCAGAAGCGGTCGGATTCAAGGACGTCCGTGAACCAGCCGACGCCGTTCCAGAAGAACTCGTTGTTGCCGAACGTGTCCTGCACCGAATAG
PROTEIN sequence
Length: 95
MSTRPKTCQIVPTTFHGMSSGSAISTRQTGTPSPFFGMLSAIRMPSGISMTRMIAEKSRLRPSASQKRSDSRTSVNQPTPFQKNSLLPNVSCTE*