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SCNpilot_expt_1000_bf_scaffold_25283_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(857..1606)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, amino acid substrate binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV89_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 249.0
  • Bit_score: 393
  • Evalue 1.30e-106
  • rbh
ABC transporter, amino acid substrate binding protein {ECO:0000313|EMBL:EYR79005.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 249.0
  • Bit_score: 393
  • Evalue 1.80e-106
amino acid ABC transporter substrate binding protein similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 247.0
  • Bit_score: 243
  • Evalue 5.20e-62

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGAAGACCATGCTTTTGACGCTTTGCCTGTCGTTCGCTTCCCTTTCGACCGCGCACGCCGAAACGCTCCGCTTCATCACCGAGGAATACGCACCGTTCAACTACACCAGGAACGGCAGGATCACCGGCATCGGCGTGGACCAGGTCGAGGCGATCGCAAAGGCGGCCGGCATCGACTACACGCTCGAAATGATGCCCTGGGCGCGCGCCTTCGCCACGGCGCGCAGCCAGCCGATGCACTGCGTCTTCACGACGGGCTACAATCGCGAGCGCGCCGGCCAGTTCGTCTGGGTCAATCCTCTCCTGAAGGACGAGATGGTGCTCGTAAAGCGCAAGGACGGCAGCAAGGGGCCGGCGACGATGGACGAGGCGCTCGGCATGAAGGTCGGCTCGCAGCGCGGCGACTTCGGCGTCGAGGCGCTGGAGGCACTCGGCTTCACCAATATCGACCTGGCCGCCGACATCGACCTTTCCTTGCGCAAGCTGCTTTCCGGCCGCATCGACCTCATGCCGACCTCGTACAAGACCTACGAGAACCTGGTGAAGGAAGGAAGGCCCGTCGAGAAGGCCTTGCGCATGGCCGGCCAAGTCTACGGCATTGCCTGCCAGAAGGACACCCCGCCCGATCTCGTCGCCCGCCTGCAGGCCGAGCTGGACAAATTGATCCTGAGCGGCGGGCAGGACCGCATCTTCACCGCCTACGGCCTGCCGCCGAACACCCGGACGGCGGAAAACGGCGGGAAGAATTGA
PROTEIN sequence
Length: 250
MKTMLLTLCLSFASLSTAHAETLRFITEEYAPFNYTRNGRITGIGVDQVEAIAKAAGIDYTLEMMPWARAFATARSQPMHCVFTTGYNRERAGQFVWVNPLLKDEMVLVKRKDGSKGPATMDEALGMKVGSQRGDFGVEALEALGFTNIDLAADIDLSLRKLLSGRIDLMPTSYKTYENLVKEGRPVEKALRMAGQVYGIACQKDTPPDLVARLQAELDKLILSGGQDRIFTAYGLPPNTRTAENGGKN*