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SCNpilot_expt_1000_bf_scaffold_5613_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 236..1531

Top 3 Functional Annotations

Value Algorithm Source
purA; adenylosuccinate synthetase similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 430.0
  • Bit_score: 789
  • Evalue 5.70e-226
  • rbh
Adenylosuccinate synthetase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN93_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 430.0
  • Bit_score: 789
  • Evalue 1.80e-225
  • rbh
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 430.0
  • Bit_score: 789
  • Evalue 2.60e-225

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGGCAAGTGTCGTAGTTGTCGGTTCGCAATGGGGTGACGAAGGCAAGGGCAAGATTGTCGACTGGCTTTCGGAACGGGCGGAAGTGATCGTTCGCTACCAGGGCGGCCATAATGCCGGCCACACCCTTGTCATCGACGGTGTCAGCTACAAGCTGGCTTTGCTGCCTTCGGGCCTCGTGCGCGGGAAGCTCAGCGTCATCGGGAACGGCGTCGTCGTCGATCCGCATCATTTCGTCGCGGAAGTGGAAAAGCTGCGTGCCCAGGGCGTGGCGGTAACGCCCGAGGTGCTGCGCATCGCGGACAATGCGCCGCTCATCCTTTCCCTGCACCGGGACCTCGATGCGCTGCGTGAAGACGCGGCCTCCAGCAACGGCACCAAGATCGGCACGACGCGCCGCGGCATCGGCCCGGCTTATGAGGACAAGGTCGGTCGCCGTGCCATTCGCGTGATCGATCTGGCGGAGCCCGAGACGCTCCGGCCGAAGATCGAGCGGCTGCTGACCCACCACAACGCACTGCGCCGCGGCATGGGGCTCGCCGAGATTTCCGTCGAGTCGCTCGAGGCCGAGCTGACGTCGGTCGCCGCGCACATCCTGCCCTATGTCGACCGGGTCTGGGACCTCCTCGACAAGCAGCGGAAGTCCGGCGCGCGTATTCTCTTCGAAGGGGCGCAGGGCGCGCTGCTCGACAACGACCACGGCACCTACCCGTTCGTGACGTCGTCCAACACCGTTGCGGGACAGGCGGCAGCCGGTTCGGGCCTCGGCCCGACGGCGATCAGCTACGTGCTGGGGATCACGAAGGCCTACACCACCCGCGTGGGCGAGGGGCCGTTCCCCTGCGAACTGGACGACAAGATCGGCAAGCACCTTGCGACCGTCGGCCGCGAGGTGGGCGTCAATACGGGCCGTCCGCGCCGTTGCGGCTGGTTCGATGCCGTGCTGGTGCGCCAGACCGTCAAGACCAGCGGCATCACCGGCATCGCGCTCACCAAGCTCGACGTCCTCGACGGCCTCGACGAACTGAAGATCTGCGTTGGCTACAAGCTGGACGGCAAGGAGATCGACCACCTGCCGGCAAGCCAAGGCCAGCAGGCCCGCGTCGAGCCGATCTACATCACGCTGGAAGGCTGGAAGGAATCGACGGTCGGCGCGCGGAGCTGGGCAGACCTGCCGGCGCAGGCGATCAAGTATGTCCGCCAGGTCGAAGAGCTGATCGGCGCGCCCGTCGCCCTGCTTTCGACCAGCCCGGAGCGTGACGACACCATACTTGTGACCGACCCGTTTGAGGACTAA
PROTEIN sequence
Length: 432
MASVVVVGSQWGDEGKGKIVDWLSERAEVIVRYQGGHNAGHTLVIDGVSYKLALLPSGLVRGKLSVIGNGVVVDPHHFVAEVEKLRAQGVAVTPEVLRIADNAPLILSLHRDLDALREDAASSNGTKIGTTRRGIGPAYEDKVGRRAIRVIDLAEPETLRPKIERLLTHHNALRRGMGLAEISVESLEAELTSVAAHILPYVDRVWDLLDKQRKSGARILFEGAQGALLDNDHGTYPFVTSSNTVAGQAAAGSGLGPTAISYVLGITKAYTTRVGEGPFPCELDDKIGKHLATVGREVGVNTGRPRRCGWFDAVLVRQTVKTSGITGIALTKLDVLDGLDELKICVGYKLDGKEIDHLPASQGQQARVEPIYITLEGWKESTVGARSWADLPAQAIKYVRQVEELIGAPVALLSTSPERDDTILVTDPFED*