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SCNpilot_expt_1000_bf_scaffold_5613_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6620..7321

Top 3 Functional Annotations

Value Algorithm Source
tRNA/rRNA methyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUE7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 233.0
  • Bit_score: 386
  • Evalue 1.90e-104
  • rbh
tRNA/rRNA methyltransferase {ECO:0000313|EMBL:EYR80836.1}; EC=2.1.1.- {ECO:0000313|EMBL:EYR80836.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 233.0
  • Bit_score: 386
  • Evalue 2.70e-104
tRNA/rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 232.0
  • Bit_score: 310
  • Evalue 4.20e-82
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGCTCGGCCAGGCGCAGGCCCGCGACAACGGCTTTGCCGCCGAGGCCATCCTGCTTCTGGAAAACCGTCTCGCCGGGATGGGCGAGGTCCTCGCCGCCTTTCCGCCAAGCGTGCCGGTCTATGTCGCCGCGCAGGCGGTCTTCGATGCGATTGCCGGCTTCCACATGCATCGCGGCGTGCTGGCGCTCGGGCGCAGGCCAGCGGCCGAGATCGGTGCATCGCTCCTCGGCCGCCTGCCGGAGACCAGCCTGGTGCTGGCCGGCTGCGGCCTTTCCAACCATGACAATGCCGGCTCCATCTTCCGCAATGCCGCGGCCTTTGGCGCCGACGCGGTGTTTCTCGACGAAACGTCGTGCGATCCGCTCTACCGGAAGGCGATCCGGGTGTCGGTCGGCTCCGTTCTGACCGTGCCGTTCGCGCGGGGGCGCACCTCCGAAGCCATGCTCCGCGACCTGGCGGCGGCGGGTTTCGAGATATGGGGGCTTTCGCCGCGCGGCGCGGTGCCCGTCGCGGCCATTCCGGCGGCGCGGCGCATCGCGCTCGTGCTGGGAACGGAAGGCGAGGGGCTGCCGGAGACGATCCTCACCTCGTTCCGCACGGCCCGCATCCCGCAGCGCCCGGGGCTCGACAGCCTCAACGTGGCAACGGCGAGCGGCATCGCGCTCTACCAGATTGCTCTTGCGATGGGGCGGGTGGCCTAG
PROTEIN sequence
Length: 234
MLGQAQARDNGFAAEAILLLENRLAGMGEVLAAFPPSVPVYVAAQAVFDAIAGFHMHRGVLALGRRPAAEIGASLLGRLPETSLVLAGCGLSNHDNAGSIFRNAAAFGADAVFLDETSCDPLYRKAIRVSVGSVLTVPFARGRTSEAMLRDLAAAGFEIWGLSPRGAVPVAAIPAARRIALVLGTEGEGLPETILTSFRTARIPQRPGLDSLNVATASGIALYQIALAMGRVA*