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SCNpilot_expt_1000_bf_scaffold_6081_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1148..2074

Top 3 Functional Annotations

Value Algorithm Source
Glycine cleavage system transcriptional activator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2U3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 308.0
  • Bit_score: 570
  • Evalue 9.50e-160
  • rbh
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:EYR83444.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 308.0
  • Bit_score: 570
  • Evalue 1.30e-159
gcvA1; glycine cleavage system transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 306.0
  • Bit_score: 500
  • Evalue 2.90e-139
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGGAAACCCTGCGTCGCCTGCTCCCTTCCGCCTCCAGCCTCATCGTCTTCGAGGCCGCCGGCCGGCACCAGAATTTCACCCGTGCCGCAGGCGAGCTCGGCATGACGCAGGCGGCCGTCTCCTATGCGGTGCGCAATCTGGAGGACCAGCTCGGCGTCGCGCTCTTCCACCGCGCCCACCGCGCGGTGAAGCTGACGGATGCCGGCGAGCGCTTCCATGCGGACGTGACGCTCGGGCTCTCGCGCATCCAGAAATCGGCGGAGGACATCCGCGCCAAGGGACGCGAGACGAATGTGACGCTCGCCGCCTCCACCGCCTTCGCCTCGATGTGGATGCTGCCGCGGCTCGCCAAGCTGAGGGCCGACCTGCCCGACATCGACCTTCGCATCCAGACCAGCGTGCGCGACCTCGACCTCGACGAGGAGCCGATCCCGCTCGCCATCCGCGGCGGCGACCCGGCGAAATGGCCGCGCTACCATTCCGCGCTGCTCGCGCCCGAGGTCATCACGGCGGTGGCGAGCCCCGCCTTCGTGGAAAGCCGCGGCCATCCGCGGACGCCGGAAGAATTGCTGAAGCTGCCGCTCATCCACCTGGAGGAGCCGGTGCGGGCGACCTGCGACTGGCCGGAATGGTTCTCAAGCGCGGGCGTGCGCTATCCCGCGCAGGCGCGGCGGCTCGCCATCAACGACTATGTCCTGGTGATCCAGGCGGTGCTTTCGGGCGAAGGCGTCGCGCTCGGCTGGCGGCATCTCATCGAAGGGCAGGTGCGCTCGGGCGCGCTCGTGCCCGTCGGCGGCCATGTGCTGAAGACGGACGACGCCTTCTACATCGTCTGGCCGCGCTCGCGCGAGCTCAACGGGCCGGCGCGGCGCGTGCGCGACTGGTTGCAGGAGGAAGGCCGACAGAGCCGGGCGATGGAGGCCTGA
PROTEIN sequence
Length: 309
METLRRLLPSASSLIVFEAAGRHQNFTRAAGELGMTQAAVSYAVRNLEDQLGVALFHRAHRAVKLTDAGERFHADVTLGLSRIQKSAEDIRAKGRETNVTLAASTAFASMWMLPRLAKLRADLPDIDLRIQTSVRDLDLDEEPIPLAIRGGDPAKWPRYHSALLAPEVITAVASPAFVESRGHPRTPEELLKLPLIHLEEPVRATCDWPEWFSSAGVRYPAQARRLAINDYVLVIQAVLSGEGVALGWRHLIEGQVRSGALVPVGGHVLKTDDAFYIVWPRSRELNGPARRVRDWLQEEGRQSRAMEA*