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SCNpilot_expt_1000_bf_scaffold_6081_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6081_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1059)
DNA (1059bp) protein (353aa)
Trimethylamine methyltransferase MttB1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY74_9RHIZ rbh
Trimethylamine methyltransferase MttB1 {ECO:0000313|EMBL:EYR83443.1}; EC=2.1.1.250 {ECO:0000313|EMBL:EYR83443.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
mttb1; trimethylamine methyltransferase mttB TMA methyltransferase; K14083 trimethylamine methyltransferase [EC:2.1.1.-] rbh
SCNpilot_expt_1000_bf_scaffold_6081_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1148..2074
DNA (927bp) protein (309aa)
Glycine cleavage system transcriptional activator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2U3_9RHIZ rbh
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:EYR83444.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
gcvA1; glycine cleavage system transcriptional activator rbh
SCNpilot_expt_1000_bf_scaffold_6081_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2078..2413)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTT7_9RHIZ
PilZ domain-containing protein {ECO:0000313|EMBL:EYR83445.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6081_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2532..3833)
DNA (1302bp) protein (434aa)
Putative sensory box/GGDEF family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERV7_9RHIZ rbh
Putative sensory box/GGDEF family protein {ECO:0000313|EMBL:EYR83446.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Diguanylate cyclase rbh
SCNpilot_expt_1000_bf_scaffold_6081_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4045..4677)
DNA (633bp) protein (211aa)
Putative PAS/PAC sensor protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYY6_9RHIZ rbh
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EYR83448.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
PAS/PAC sensor protein
SCNpilot_expt_1000_bf_scaffold_6081_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4712..5290)
DNA (579bp) protein (193aa)
Putative PAS/PAC sensor protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYY6_9RHIZ
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EYR83448.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hybrid sensory histidine kinase
Displaying 6 items

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