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SCNpilot_expt_1000_bf_scaffold_3587_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(7265..8290)

Top 3 Functional Annotations

Value Algorithm Source
Sulfate-binding protein Sbp n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXS6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 341.0
  • Bit_score: 648
  • Evalue 4.00e-183
  • rbh
Sulfate-binding protein Sbp {ECO:0000313|EMBL:EYR81639.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 341.0
  • Bit_score: 648
  • Evalue 5.60e-183
sulfate ABC transporter substrate-binding protein; K02048 sulfate transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 341.0
  • Bit_score: 591
  • Evalue 2.40e-166
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGTCGACGTTTATGAAGAGGGCCGGGGTTTTCGCCCTCAGTCTGGGGCTCGTGTTCGGCGGGGTGACGGGAGCGGTGGCGCAGACCACGCTGCTCAACGTCTCCTACGACCCGACGCGCGAGCTCTACAAGGATTACAATACTGCCTTCGCGGCACACTGGAAGGCCGAGACCGGCGAGGACGTGACGATCCAGCAGTCGCATGGCGGCTCGGGCAAGCAGGCCCGCGCGGTGATCGACGGACTGGAGGCCGACGTGGTGACGCTGGCGCTCGAAAGCGACATCAACGCCATCGTGGAAAAGACGGGCAAGATCGCCAAGGACTGGCGCTCGCGCCTGCCGAACAATTCCGCGCCCTATACCTCGACCATTGTCTTCCTGGTGCGCAAGGGCAACCCGAAGGGCATCCATAACTGGGGCGACCTCGTGAAGGGCGACGTGCAGATCGTCACCCCGAACCCGAAGACCTCGGGCGGCGCGCGCTGGAACTACCTTGCGGCCTGGGCCTGGGCGAACGAGGAATTTTCCGGCGACCAGGACAAGATCAAGGCCTATATCGCCGAGCTCTTCAAGCGGGCGCCGGTGCTCGATACGGGCGCGCGCGGTTCGCTGACCACCTTCGCCCAGCGCCAGATCGGCGACGTGCTGCTCGCATGGGAAAACGAGGCCTATCTCGCGGGCGCCGAGTTCGGCGCCGATTCCTTCGACATCGTCGCCCCGCCGATCTCGATCCTCGCCGAGCCGCCGGTCGCCGTGGTCGACGGCAATGTCGACGCCAAGGGCACGCGCAAGCAGGCGGAAGCCTATCTCGAATATCTCTACTCGGAAGAGGGCCAGAACATCGCGGCCAAGCACTTCTATCGCCCGTCCAAGCGCGAGGTGGTGAAACCCGAGTTGCTGCAACAGCTTCCCGACATTAAGCTGGTGACGATCGACGACCCGATCTTCGGCGGCTGGGCAAAGGCACAGCCCGAGCATTTCGGCGACGGCGGTGTCTTCGACCAGATCTACAAGCCGGGGAACTGA
PROTEIN sequence
Length: 342
MSTFMKRAGVFALSLGLVFGGVTGAVAQTTLLNVSYDPTRELYKDYNTAFAAHWKAETGEDVTIQQSHGGSGKQARAVIDGLEADVVTLALESDINAIVEKTGKIAKDWRSRLPNNSAPYTSTIVFLVRKGNPKGIHNWGDLVKGDVQIVTPNPKTSGGARWNYLAAWAWANEEFSGDQDKIKAYIAELFKRAPVLDTGARGSLTTFAQRQIGDVLLAWENEAYLAGAEFGADSFDIVAPPISILAEPPVAVVDGNVDAKGTRKQAEAYLEYLYSEEGQNIAAKHFYRPSKREVVKPELLQQLPDIKLVTIDDPIFGGWAKAQPEHFGDGGVFDQIYKPGN*