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SCNpilot_expt_1000_bf_scaffold_3587_curated_23

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 20979..21263

Top 3 Functional Annotations

Value Algorithm Source
Formate dehydrogenase-O major subunit {ECO:0000313|EMBL:EYR84548.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EYR84548.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 95.0
  • Bit_score: 199
  • Evalue 1.90e-48
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003712D54 similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 95.0
  • Bit_score: 193
  • Evalue 9.70e-47
formate dehydrogenase, alpha subunit (EC:1.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 95.0
  • Bit_score: 182
  • Evalue 7.00e-44

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGACGAACGCCTGGACCGACATCAAGAACACCGACCTCGTCATCGTCATGGGTGGCAATGCAGCGGAAGCGCACCCCTGCGGCTTCAAATGGGTGACGGAGGCCAAGCACCATCGCGGCGCACGGCTGATCGTCGTCGACCCGCGCTTCAACCGCACGGCCTCGGTCGCCGACGTCTATGCGCCGATCCGCCCGGGCTCGGACATCGCCTTCCTGATGGGCGTCATCCGCTACTGCATCGAGAACGACAAGGTGCAGTGGGACTATGTGAAGGCCTACACCAAC
PROTEIN sequence
Length: 95
MTNAWTDIKNTDLVIVMGGNAAEAHPCGFKWVTEAKHHRGARLIVVDPRFNRTASVADVYAPIRPGSDIAFLMGVIRYCIENDKVQWDYVKAYTN