ggKbase home page

SCNpilot_expt_1000_bf_scaffold_9710_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 887..1798

Top 3 Functional Annotations

Value Algorithm Source
gentisate 1,2-dioxygenase n=1 Tax=Aureimonas ureilytica RepID=UPI00035DEB93 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 303.0
  • Bit_score: 487
  • Evalue 1.40e-134
  • rbh
Gentisate 1,2-dioxygenase {ECO:0000313|EMBL:KJC42280.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 303.0
  • Bit_score: 481
  • Evalue 1.00e-132
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 302.0
  • Bit_score: 473
  • Evalue 4.90e-131
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGCGTCTTGTCACTTATCGCAGCAATGCCGAGGCGGAAGCCCGTCTCGGTGTCCTCGACGGCGATCTGGTCGTCGATGCCCAACGCCTGGGCGCGCAGGCGGGTTTTCCCCTGCCGTCCCGGATGCTCGACCTGATCGACCTGGGGCCGGCCGCACTGGCCGTGCTGGGGACGGCGCTGGCCGACACGCGCGGCCGCTGGCAGGCCGGCGTCGCTGTGCCGGCCGGAAACGTGAAGCTGCTCGCCCCGATCCCGCGGCCGCGGAAGAACATCTTCGGCATAGGCCTGAACTATGTCGAGCATGTCGCCGAATCCGCGCGCACGCTCGATACCTCGAAGGAGTTGCCGAAGCAGCCGGTGATCTTCTCGAAGCCGCCGACCACGATCGTCGGCCCGGGCGACGCCATCGAGCACAACGCCAGGATCACCCGGCAACTGGACTGGGAGGTCGAGCTGGCGGTGATCATCGGCCGCACCGCGCGCCGCGTCACCGAGGCGGACGCGCTGTCCTGCGTCTTTGGCTACAGCGTGATGATCGACATGAGCGCGCGCGACTGCCGCCGGGCGGGCCAGTGGATCTATTCCAAGGGGCAGGACACGTATGCGCCCTTCGGCCCCTGCATCGTCACCGCCGACGAGATCGTCGATCCCCACAGCCTCGACCTGTGGCTGACGGTCAACGGTGAGGTGAAGCAGAAGTCGAACACCCGTCACATGCTGTTCAAGGTTCCTGCGCTGATCGCCGACATCAGCGCCGGCATCACGCTGGAGCCCGGCGACATCATCGCCACCGGGACGCCGGACGGTGTGGGGGCGGGGCGCGATCCGCAGGAATGGGTCTGGCCCGGAGACGTGATCGAAGCTGGTGTCGACGGTATCGGCAGGCTCCGTCACTCGGTGGTCGCTGTCTAG
PROTEIN sequence
Length: 304
MRLVTYRSNAEAEARLGVLDGDLVVDAQRLGAQAGFPLPSRMLDLIDLGPAALAVLGTALADTRGRWQAGVAVPAGNVKLLAPIPRPRKNIFGIGLNYVEHVAESARTLDTSKELPKQPVIFSKPPTTIVGPGDAIEHNARITRQLDWEVELAVIIGRTARRVTEADALSCVFGYSVMIDMSARDCRRAGQWIYSKGQDTYAPFGPCIVTADEIVDPHSLDLWLTVNGEVKQKSNTRHMLFKVPALIADISAGITLEPGDIIATGTPDGVGAGRDPQEWVWPGDVIEAGVDGIGRLRHSVVAV*