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SCNpilot_expt_1000_bf_scaffold_3265_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 8720..11761

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA or RNA helicase {ECO:0000313|EMBL:EYR78955.1}; EC=3.6.1.- {ECO:0000313|EMBL:EYR78955.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 999.99
  • Bit_score: 1836
  • Evalue 0.0
ATP-dependent DNA or RNA helicase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C049_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 999.99
  • Bit_score: 1836
  • Evalue 0.0
  • rbh
helicase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 999.99
  • Bit_score: 1619
  • Evalue 0.0
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3042
ATGATCCTGAGCGGCCGCGGCGTGACCGCGGTGCTCGGCCCGACCAATACGGGCAAGACCCACTACGCAATCGAGCGCATGGTGGCACATGAGACGGGCATCATCGGCCTGCCTCTGCGCCTTCTCGCGCGCGAGGTCTATACGCGCCTCGTCGAGAAGGTCGGCCAGCACAATGTCGCGCTCGTCACCGGCGAGGAGAAGATCACGCCGCATATGGCGCGCTTCTCCGTCTGCACGGTGGAGGCGATGCCGCGCGAGACGCGGGCTTCCTTCGTCGCCATCGACGAGGTGCAGCTTGCCGGCGACCTCGAACGCGGCCACATCTTCACCGACCGGGTTCTGCATCTGAGGGGCCGCGACGAGACGCTGCTGCTCGGCGCCGCCACCATGAAGCCGATCCTCGAGCAGCTCCTGCCCGGCATCCACGTCGTCGAGCGGCCGCGCCTGTCGCAGCTCTTCTATTCCGGCTCGAAGAAGATCACCCGCCTGCCGCAGCGCACCGCCATCGTCGCCTTCTCGGCCGACGAGGTCTATGCCATCGCCGAGCTCATCCGCCGCCAGCGCGGCGGGGCGGCGGTCGTGCTCGGCGCGCTCTCGCCGCGCACCCGCAACGCGCAGGTCGCGCTCTACCAGGAGGGCGACGTCGAATATCTCGTCGCCACCGACGCCATCGGCATGGGCCTCAATCTCGACGTGGACCACGTCGCCTTCGCGCAGGACCGCAAGTTCGACGGCTACCAGTTCCGCAACCTCAACCCGGCGGAACTCGCCCAGATCGCCGGCCGCGCCGGCCGGCACATGCGCGACGGCACCTTCGGCGTGACCGGCCGCGTCGATCCCTTCGACGACGAACTGGTCCAGCGCATCGAGACGCATCACTTCGATCCCGTCAGGGTGCTGCAATGGCGCACCCCCCGCTTCGACTATGCCTCGCTGCAATCGCTCCGCCAGTCGCTCGACGCGCCGCCGCCCATCGGTGGCCTGACGCGGGCGCTGCCGGCGGTCGACCAGCAGGCACTGGAGCATCTGTCGCGCTACCCCGACATCCGCGAGCTGGCCACCACGCCGGAGCGCGTCGAAAAGCTCTGGGAGGCCTGCGCGCTTCCCGACTATCGCCGCATCGCCCCCGCCCAGCACGCCGACCTCATCTCGACGCTCTATGCGGACCTCGTCAAGCGCGGCACGGTCAACGAGGACTTCATGGCGGACCAGGTCCGCCGCGCCGACCGGACCGACGGCGAAATCGACACGCTTTCGGCACGAATCGCGCAGATAAGGACCTGGACCTATGTGTCGAATCGACCCGGATGGCTTGCCGATCCGACACACTGGCAGGAAAAGACGCGGGAAATCGAAGACCGATTGTCCGATGCGCTACATGAACGGTTGACGAAACGCTTTGTTGATCGCAGGACATCTGTGCTCATGAAGCGCCTGAGAGAGAATGCGATGCTGGAAGCTGAAATCAGTGTGAATGGCGATGTCTTCGTGGAAGGACATCATGTCGGGCAGTTGGCCGGTTTCCGGTTCACGCTCGTCGCCGGAACGGAAGGACCCGACGCGAAGGCCGTGCAGGCGGCCGCGCAGAAGGCGCTCGCGCTGGAGTTCGAAGCCCGTGCCGCGCGCCTGCATGCGGCCGGCAATGCCGATCTCGCCCTCGGCTCGGACGGCACCGTGCGCTGGCTCGGCGATCCCGTCGCGCGCCTTTCCGCCTCCGACCACGTCATGCGCCCGCGCGTCATCCTGCTGTCCGACGAGCAACTGACGGGCAACGCCCGCGACCACGTCGCCGCCCGCGTCGAGCGCTTCGTCAATCACCACATCGCGACCGTGCTCAAGCCGCTCGACGATCTCTCGCGCGCCGAAGACCTGCAGGGCCTTGCCAAGGGCCTCGCCTTCCAGCTCGTCGAGAACCTCGGCGTGCTCTTCCGCCGCGACGTCGCCGACGACGTCAAGGCGCTCGACCAGGACGCCCGCGCCTCCATGCGCAAGCACGGCATCCGCTTCGGCGCCTACCACATCTTCATGCCGGCGCTGTTGAAGCCCGCCCCGGCCGAACTCATCACGCTGCTCTGGGCGCTGAAGAACGACGGCCTCGACAAGCCGGGCTACGGCGACCTCATCCCGGTGCTGGCCGCCGGCGGCACCTCGGTCGTCACCGATCCGGCCTTCGAGCGCGCCTTCTACAAGCTCGCCGGCTTCCGCTTCCTCGGCAAGCGCGCCGTGCGCATCGACATCCTCGAGCGTCTCGCCGACCTCATCCGTCCGCTCCTGCAGTGGAAGCCCGGCACGCCGCGCCCGGACGGCGCCTATGACGGCCGCCGCTTCACGGCGACCACCGCCATGCTCTCCATCCTCGGCGCGACGCCTGACGACATGGAAGAGATCCTCAAGGGCCTCGGCTACCGCGCCGACAGCGTGAAGGCCGAGGAGGCCGCCGCCTTCCTCGCCGCGCAGGCACCGGCCGCGGCCGCGGCCGGCTCCGAAACCCCGGCCGAGACGCCAACGGAAACGTCCGACGAGCACGACGCGGATGCGGCGGAAGGCGAGGCCGAGGCGCCTGCCGCTGCCGCCGAACAGGTCCCGGTCGCCGAGCCGGCAGAGGCCGCAGAACCCGTTGCCGAGGCACCGGCCGCCGCCGAAGCGGCTGCCGATGGCGAACCGGCGGAAGCCAAGCCGGTCCTTCTCTGGCGCCCGGGTTCGCGCCATGACAACCAGCGCCAGGGCCACCGCCATGGCGGCGAGCGCCAGGGTGACCGTCAGGGCCAGGGCGAACGCCGCGGCGGTGAACGCAATCGCGGCCAGCAGGCCGGCGAGCGCGGCGAACGGCGCGAAGGCGGCCGTGGCGGCCGTCCGGACCAGAAGGGCCGCGACGGAAAGCCGCAGGGCGGCAACCGCCCGGACCGCGGCGAGCGCAACGAGCGCGGCGGCAAGCCGCAGCAGGCGAAGTTCGAGGCCCGGCCGCCCCGCAAGGAAAAGCCGATCGACCCGGATTCGCCCTTCGCCAAGCTCGCGGCGCTCAAGGAGCAGATGAAAAAGTAG
PROTEIN sequence
Length: 1014
MILSGRGVTAVLGPTNTGKTHYAIERMVAHETGIIGLPLRLLAREVYTRLVEKVGQHNVALVTGEEKITPHMARFSVCTVEAMPRETRASFVAIDEVQLAGDLERGHIFTDRVLHLRGRDETLLLGAATMKPILEQLLPGIHVVERPRLSQLFYSGSKKITRLPQRTAIVAFSADEVYAIAELIRRQRGGAAVVLGALSPRTRNAQVALYQEGDVEYLVATDAIGMGLNLDVDHVAFAQDRKFDGYQFRNLNPAELAQIAGRAGRHMRDGTFGVTGRVDPFDDELVQRIETHHFDPVRVLQWRTPRFDYASLQSLRQSLDAPPPIGGLTRALPAVDQQALEHLSRYPDIRELATTPERVEKLWEACALPDYRRIAPAQHADLISTLYADLVKRGTVNEDFMADQVRRADRTDGEIDTLSARIAQIRTWTYVSNRPGWLADPTHWQEKTREIEDRLSDALHERLTKRFVDRRTSVLMKRLRENAMLEAEISVNGDVFVEGHHVGQLAGFRFTLVAGTEGPDAKAVQAAAQKALALEFEARAARLHAAGNADLALGSDGTVRWLGDPVARLSASDHVMRPRVILLSDEQLTGNARDHVAARVERFVNHHIATVLKPLDDLSRAEDLQGLAKGLAFQLVENLGVLFRRDVADDVKALDQDARASMRKHGIRFGAYHIFMPALLKPAPAELITLLWALKNDGLDKPGYGDLIPVLAAGGTSVVTDPAFERAFYKLAGFRFLGKRAVRIDILERLADLIRPLLQWKPGTPRPDGAYDGRRFTATTAMLSILGATPDDMEEILKGLGYRADSVKAEEAAAFLAAQAPAAAAAGSETPAETPTETSDEHDADAAEGEAEAPAAAAEQVPVAEPAEAAEPVAEAPAAAEAAADGEPAEAKPVLLWRPGSRHDNQRQGHRHGGERQGDRQGQGERRGGERNRGQQAGERGERREGGRGGRPDQKGRDGKPQGGNRPDRGERNERGGKPQQAKFEARPPRKEKPIDPDSPFAKLAALKEQMKK*