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SCNpilot_expt_1000_bf_scaffold_2043_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(6482..7969)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KCB35809.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 497.0
  • Bit_score: 657
  • Evalue 1.30e-185
Ribose ABC transporter ATP-binding protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HVK3_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 497.0
  • Bit_score: 645
  • Evalue 4.90e-182
  • rbh
ribose ABC transporter ATP-binding protein (EC:3.6.3.17); K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 499.0
  • Bit_score: 640
  • Evalue 4.90e-181
  • rbh

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Taxonomy

Bordetella sp. 8-296-03 → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1488
ATGACCACCATCCTCGAGGCACGCGCGCTGACCAAGGCCTTCCACGGCAACGTGGCGGTGGACGCGGTCGATTTCGACCTTGCGGCCGGCGAGGTCCATGCGCTTCTCGGCGAGAACGGCGCCGGCAAGTCGACCTTCAGCAAGCTCCTGGCCGGCGTCTATCCGCCCGAAGGCGGCGAGATCCTCTATCTCGGCGCGCCGCTGCGCGCCGAGGGGCCGGCGGAAGCGCTCAGCCGCGGGATCGCCATGGTCTACCAGGAAACGAGCCTCGTGCCCTCGATGACCGTGGCGCAGAACCTGTTCCTCGGCCATGAAAGGGCGTTCAACCGCCTGCGCGGCATCACCATCGCGGCGCAGCAGTTCCTGCAATCGCTGAACTTCACCGTCGATCCGACCGCGCTGGTCTCCAGCCTCGGGGCGGCCAAGCGCCAGATGGTGGAGATCGCCCGCGCCGTGCGGCTGAATGCGCGCGTCATCATCTTCGACGAGCCGACGGCGACGCTGACGCCCGAGGAGCGGCGGCATTTCTTCTCGCTGATCGAGCGCCTACGCGCCCGCGGGGTCGCCATCGTCTTCATCACCCACGCGCTGGAGGAGGCGCTCCAGATATCCGACCGCATCACCGTCATGCGCGACGGCCGCAGGGTGCTGACCGAAAAGGCCCGGGACCTGACGCAGGCGCGCATCGTCCAGGCCATGGTCGGCCGGGAACTGGCGACCGAATTCACGCCGCGCACCGGCACCCGGCCGGCCGGCGCGCGCGTGCTTTCGGTCGAGGACGTCTCGATGGGCGCGCTGGTCCGCAACACGTCCTTCTCGGTCTTCGCCGGGCAGGTGACGGGCCTCTTCGGCCTCGTCGGCTCGGGCCGCACCGAGACCGCCAAGATCGTCGCCGGAGTCTTCAAGCGCGATTTCCTGCGCGGCGGCGCTATCGAATACGAGGGCCGTCCCGTGCGCTATGCCACGCCCGGCCCGGCCGTCGCGGACGGCATCGTCTATGTGACGGAGGACCGCAAGCTCGAAGGCTTCTTCGAGAACATGTCGATTGCCGAAAACCTCTATGCCGGGCTGCTGGCGGCGGGGCTGAACCGTTTCCCCTTCGTGTCGCTGTCGGAGATGAAGGCGCTGGCCGAAGAATGGACCGGCAGGCTCGCCATCCGCTCGATCGGCGCCGAGGCGCGCGTGGTCGAGCTGTCCGGCGGCAACCAGCAGAAGGTGGTGATCGGCAAGGCGCTGATCCAGAAGCCGCGGCTCATCATCTTCGACGAGCCGACGCGCGGCGTCGACGTCGGCGCGGTGGCCGAAATCCACGCACTCATCCATCTCCTCGCCGACGAGGGCCTCGCCGTCGTGGTGATCTCCTCCTATCTCCCGGAAATCCTCTCCCTTTCCGACCGCATCCTGGTCGCGCGGCAGGGCCGGGTGGTCGAGGAATTCTCGCCCGTCGACGCATCCAGCGAAAGCATCATGTATGCCGCGGTGCACTGA
PROTEIN sequence
Length: 496
MTTILEARALTKAFHGNVAVDAVDFDLAAGEVHALLGENGAGKSTFSKLLAGVYPPEGGEILYLGAPLRAEGPAEALSRGIAMVYQETSLVPSMTVAQNLFLGHERAFNRLRGITIAAQQFLQSLNFTVDPTALVSSLGAAKRQMVEIARAVRLNARVIIFDEPTATLTPEERRHFFSLIERLRARGVAIVFITHALEEALQISDRITVMRDGRRVLTEKARDLTQARIVQAMVGRELATEFTPRTGTRPAGARVLSVEDVSMGALVRNTSFSVFAGQVTGLFGLVGSGRTETAKIVAGVFKRDFLRGGAIEYEGRPVRYATPGPAVADGIVYVTEDRKLEGFFENMSIAENLYAGLLAAGLNRFPFVSLSEMKALAEEWTGRLAIRSIGAEARVVELSGGNQQKVVIGKALIQKPRLIIFDEPTRGVDVGAVAEIHALIHLLADEGLAVVVISSYLPEILSLSDRILVARQGRVVEEFSPVDASSESIMYAAVH*