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SCNpilot_expt_1000_bf_scaffold_2043_curated_19

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(17998..18717)

Top 3 Functional Annotations

Value Algorithm Source
FCD domain protein {ECO:0000313|EMBL:KCV61807.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 226.0
  • Bit_score: 207
  • Evalue 2.30e-50
GntR family transcriptional regulator n=1 Tax=Ralstonia sp. PBA RepID=I9BSQ2_9RALS similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 231.0
  • Bit_score: 205
  • Evalue 6.20e-50
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 222.0
  • Bit_score: 194
  • Evalue 4.50e-47

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCAGGAAGCGGAAAACCAGGTGATGCGGACCGTGAACGACCTGATGGCGTTCATCCAGAAGCGCGGCTACGAGCCGGGCGAGAGACTGCCTTCCGAACGCGACCTGACCGAGCGTTTCTCGGTCGGGCGCGGGGTGATCCGCGAGGCGCTGACCTTTCTGGAGGCCAGCCGTTACATCGAGCGCAAGCGCAATTCCGGCATCTACCTGACCGACGGAATGGACCAGGTCAGCCTGGAGGCGCTGGTTCTCTATTCCAAGGTCAACATTCCCTTCGACCGCCGGACCATCATGGATTGCATGGAGGTGCGCAAGATCCTGGAGGTGCAGGCCATCGCGCTCGCCTGCAAGCGGCGCACCGAGGCCGACATCGAGACCCTGCGGCAGAACCTGCGCGACACGCGAGAAACGATCGAAGCGGGCGGAAGCATCGCCGAACGCGATTTCGAGTTCCATATGGCGGTCTTCCGCGCCGCGCAGAACGACATCTTCACCCGGGTCGTAACGCCCTTCTACCTCATGTCGCGGAACCGGCGGGAGGATTTCTTCCGCGATCCGAAGCGCGGCGACGCATCGCTCGCCCAGCACACGGCGATCACGGCGGCCATCGAGGCCCGGAACGTCGACCTCGCCGTCGAGCTGATGGACCGGCATATCGGCCGGGTCGAGGACCACTATCTGGTGTCGATGGGCGATGCGTCGCCTGCCGGAACATCCTGA
PROTEIN sequence
Length: 240
MQEAENQVMRTVNDLMAFIQKRGYEPGERLPSERDLTERFSVGRGVIREALTFLEASRYIERKRNSGIYLTDGMDQVSLEALVLYSKVNIPFDRRTIMDCMEVRKILEVQAIALACKRRTEADIETLRQNLRDTRETIEAGGSIAERDFEFHMAVFRAAQNDIFTRVVTPFYLMSRNRREDFFRDPKRGDASLAQHTAITAAIEARNVDLAVELMDRHIGRVEDHYLVSMGDASPAGTS*