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SCNpilot_expt_1000_bf_scaffold_2043_curated_21

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(19916..20413)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF1783 related cluster n=1 Tax=unknown RepID=UPI0003CF1783 similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 165.0
  • Bit_score: 166
  • Evalue 2.20e-38
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY71220.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 165.0
  • Bit_score: 166
  • Evalue 3.10e-38
ABC transporter; K02023 multiple sugar transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 165.0
  • Bit_score: 164
  • Evalue 2.70e-38

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
TTGACGCTTGCCGACCGCGTGGCGGTGATGAAGGACGGCATCATCCAGCAACTGGATTCCCCCGAGGTGGTCTACGCCACTCCGGCCAACCGCTTCGTCGCCGGCTTCCTCGGTTCGCCCGGCATGAACTTCGTCGAAGGCCGCCTCGCCGAGCGGGACGGCGGGATGGTCTTCGAGAGCGCCTCGCTGAGCCTTCCGCTTTCCGGCTATCGCTTTCTGAGCCCGGTCGAAGCGGGGCAGGCGGTGTCGCTCGGCGTGCGGCCCGAGCACGTCCGGCTGGCCGAGGATGCGGCCGGCGATCCCTTCTGGCAGGAGGCCCGGATCGAGCTGGTCGAGCCGATGGGGGCGGACGTGCTCGTCTGGGCATCCATCGGCGCCACGATGCTTTCCGCCCGTATCAACACCGACCGCCGCATCGCGCGGAGCGGAACCGTGACCCTCGGCCTGTCGTCGTCGCGCATCTCGCTTTTCGATGGCGTGAGCGGCGTGCGCCTTTGA
PROTEIN sequence
Length: 166
LTLADRVAVMKDGIIQQLDSPEVVYATPANRFVAGFLGSPGMNFVEGRLAERDGGMVFESASLSLPLSGYRFLSPVEAGQAVSLGVRPEHVRLAEDAAGDPFWQEARIELVEPMGADVLVWASIGATMLSARINTDRRIARSGTVTLGLSSSRISLFDGVSGVRL*