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SCNpilot_expt_1000_bf_scaffold_2427_curated_13

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 11760..11975

Top 3 Functional Annotations

Value Algorithm Source
Apolipoprotein A1/A4/E {ECO:0000313|EMBL:EYR80062.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 69.0
  • Bit_score: 114
  • Evalue 4.70e-23
putative kinesin-like protein similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 73.0
  • Bit_score: 77
  • Evalue 1.40e-12
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XNT8_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 74.0
  • Bit_score: 71
  • Evalue 3.20e-10

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
GTGCCGCAGCAGCGCGCGCAGCCCGTGCCCGCCGAAGCCGACGCCAAGGTGGCAGGCGGCGAAGGCGGCTGGATGCGCGATCTCCTGCGCGGCGCCGTCTCGCGCGAGGAAGCCCAGTTCAGCCAGCCGCGCGGCGAAGGCCAGGCCGCCCGCCCAGCGGACGCCCGCAACCCGCGCCATGTCGTCGAATCTCTGAACTCGCTCTCGGTCGACATC
PROTEIN sequence
Length: 72
VPQQRAQPVPAEADAKVAGGEGGWMRDLLRGAVSREEAQFSQPRGEGQAARPADARNPRHVVESLNSLSVDI