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SCNpilot_expt_1000_bf_scaffold_15094_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(867..1085)

Top 3 Functional Annotations

Value Algorithm Source
translation initiation factor IF-1 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 72.0
  • Bit_score: 145
  • Evalue 5.60e-33
Translation initiation factor IF-1 n=16 Tax=Rhizobiales RepID=IF1_RHIME similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 72.0
  • Bit_score: 145
  • Evalue 1.80e-32
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 72.0
  • Bit_score: 145
  • Evalue 2.50e-32

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGGCAAAAGAAGAAGTCCTCGAATTTCCCGGCGTCGTGACGGAACTGCTTCCGAACGCGACCTTCCGCGTCAAGCTCGAAAACGAGCACGAGATCATCGCGCACACCGCTGGCCGCATGCGCAAGAACCGCATCCGCGTTCTCGCCGGCGACAAGGTGCTGGTCGAGATGACCCCGTACGACCTCACCAAGGGTCGCATCACCTACCGTTTCAAGTAA
PROTEIN sequence
Length: 73
MAKEEVLEFPGVVTELLPNATFRVKLENEHEIIAHTAGRMRKNRIRVLAGDKVLVEMTPYDLTKGRITYRFK*