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SCNpilot_expt_1000_bf_scaffold_8565_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(45..1193)

Top 3 Functional Annotations

Value Algorithm Source
Putative cobalamin synthesis protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BYG9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 388.0
  • Bit_score: 690
  • Evalue 1.30e-195
  • rbh
Putative GTPase {ECO:0000313|EMBL:EYR79599.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 388.0
  • Bit_score: 690
  • Evalue 1.90e-195
cobalamin synthesis protein similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 392.0
  • Bit_score: 561
  • Evalue 1.70e-157
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGACCCTTGCTGAGCGGCGCGTGCCGGTTTCCGTACTGACCGGCTTTCTGGGCGCGGGCAAGACGACCCTGCTCAACCGCCTCCTGAAGGACCCGACGCTCACCGACACCGCCGTCATCATCAACGAGTTCGGCGAGGTCGGCATCGACCATCTCCTCGTCGAGCAGTCGGGCGACGGCATCATCGAACTTTCCGACGGGTGCCTGTGCTGCACGATCCGCGGCGAGCTCGTCGATACGCTCGCCGACCTGATGGACCGCATGCAGACGGGCAAGATCCAGCCGCTGAAGCGCATCGTGATCGAGACGACCGGCCTTGCCGATCCCGCCCCCGTGCTCCAGGCCGTCATGGGCAACCCGATCCTCTCCCAGTCCTTCGGCCTCGACGGCGTGATCACCGTCGTCGATGCCGTCAACGGTCTCTCGACGCTCGCCAACCATCCCGAGGCGGTCAAGCAGGTCGCGGTCGCCGACCGCGTGCTGATCAGCAAGACCTCGCTTGCCGACGCCGAAACGCTCGCCGCCATCACCAGGGAAATCGCCGCGCTCAACCCGCGCGCCGCCGTCTTGGATGTCGACACGCCCGGCCTTGCCGGCCCGGACCTCCTCGCCAACGGCCTCTACGATCCCGGCAGCAAGATACCGGACGTCCGCCGCTGGCTGCATGAGGAGTCGCACGGCCACCATCACCACCATGATCATGATCATGGTCACGGGCATCACCACCACGGGCACGACCACCACCATCACGCCCATGACGTGATGCGGCACGACGCGACGATCCGCTCCTTCAGCATCGTCTACGACCGTCCCATCGACCCGATGGCGCTGGAAATGTTCATCGACCTCCTGCGCTCGGCCCATGGTGAAAAACTGCTGCGCATGAAGGGCATCGTGCTGATGAGCAACAGCCCGGAGCGTCCTCTGGTGCTGCACGGCGTGCAGAGCGTCTTCCATCCGCCGGAGCGGCTTGCCGCCTGGCCGGACCCGGACGACCGCCGCACGCGGCTGGTGCTGATCACCAAGGACCTGCCGGAAGCCTTCGTGCGCGACCTCTTCGATGCCTTTACCGGCACGCCGAAGATCGACCGCCCGGACCGCGCGGCGCTCGCCGACAATCCGCTCGCGATACCGGGCTTGAAACTCTAG
PROTEIN sequence
Length: 383
MTLAERRVPVSVLTGFLGAGKTTLLNRLLKDPTLTDTAVIINEFGEVGIDHLLVEQSGDGIIELSDGCLCCTIRGELVDTLADLMDRMQTGKIQPLKRIVIETTGLADPAPVLQAVMGNPILSQSFGLDGVITVVDAVNGLSTLANHPEAVKQVAVADRVLISKTSLADAETLAAITREIAALNPRAAVLDVDTPGLAGPDLLANGLYDPGSKIPDVRRWLHEESHGHHHHHDHDHGHGHHHHGHDHHHHAHDVMRHDATIRSFSIVYDRPIDPMALEMFIDLLRSAHGEKLLRMKGIVLMSNSPERPLVLHGVQSVFHPPERLAAWPDPDDRRTRLVLITKDLPEAFVRDLFDAFTGTPKIDRPDRAALADNPLAIPGLKL*