name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_8565_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(45..1193)
|
Putative cobalamin synthesis protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BYG9_9RHIZ
rbh
Putative GTPase {ECO:0000313|EMBL:EYR79599.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cobalamin synthesis protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1208..2320)
|
D-alanyl-D-alanine carboxypeptidase DacF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EGI2_9RHIZ
rbh
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EYR79600.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2452..3624
|
Hippurate hydrolase HipO n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWD5_9RHIZ
rbh
Hippurate hydrolase HipO {ECO:0000313|EMBL:EYR79601.1}; EC=3.5.1.32 {ECO:0000313|EMBL:EYR79601.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hipO1; Putative hippurate hydrolase (EC:3.5.1.32)
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_trna_1
unknown
|
Not on your lists |
3761..3834
|
transferRNA
|
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3857..4078)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYH4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79602.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4222..4665)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D296_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79603.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5090..6265
|
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6S2_9RHIZ
rbh
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6286..7500)
|
5-aminolevulinate synthase HemA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXY5_9RHIZ
rbh
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:0000256|RuleBase:RU910713}; Delta-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7744..8541)
|
Carbon monoxide dehydrogenase medium chain n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHU1_9RHIZ
rbh
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL {ECO:0000313|EMBL:EYR79606.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EYR79606.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
carbon monoxide dehydrogenase medium subunit transmembrane protein (EC:1.2.99.2)
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_9
unknown
|
Not on your lists |
9098..9256
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_10
unknown
|
Not on your lists |
9263..9508
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_11
unknown
|
Not on your lists |
10607..10783
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10990..11481)
|
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS {ECO:0000313|EMBL:EYR79607.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EYR79607.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
coxS; putative carbon-monoxide dehydrogenase small subunit; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Putative carbon-monoxide dehydrogenase small subunit n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A1L0_RHIFH
|
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_13
unknown
|
Not on your lists |
comp(12844..12963)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_14
unknown
|
Not on your lists |
comp(13021..13233)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13347..14378
|
Putative cell surface protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU74_9RHIZ
rbh
Putative cell surface protein {ECO:0000313|EMBL:EYR79609.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cell surface protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_8565_curated_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14480..14611
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D371_9RHIZ
Autotransporter secretion inner membrane protein TamB {ECO:0000313|EMBL:EYR79610.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|