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SCNpilot_expt_1000_bf_scaffold_8565_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(7744..8541)

Top 3 Functional Annotations

Value Algorithm Source
Carbon monoxide dehydrogenase medium chain n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHU1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 265.0
  • Bit_score: 470
  • Evalue 1.20e-129
  • rbh
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL {ECO:0000313|EMBL:EYR79606.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EYR79606.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 265.0
  • Bit_score: 470
  • Evalue 1.60e-129
carbon monoxide dehydrogenase medium subunit transmembrane protein (EC:1.2.99.2) similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 265.0
  • Bit_score: 407
  • Evalue 2.90e-111
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGTACGCAACGAATTATCATCGCGCCTCCTCCCTCGCGGATGCGGCCAGGCTGCAATCGTCGTCCGACGAGGCGAAATACGTCTCCGGCGGCATGACGCTGATCCCGACCATGAAGCAGCGGCTTGCCGCCCCCTCCGATCTCGTGGACCTGCGCCACGTCCCCGAGCTCAAGGGCATCTCGGTCAGCGGCAACAGGGTCAGGATCGGCGCCGGCACGACGCATCACGAGGTCTCGACCTCGGCGGAGCTGAAGGCGGTCTGCCCGGCGATCTGCCATCTGGCCTCCCATATCGGCGATCCGCATGTGCGCCACATGGGCACGATCGGCGGCTCCATCGCCAACAACGACCCGGCCGCCGACTATCCCTCCGCCATGCTGGCGCTGGGCGCGACGATCGTCACCGACAGGCGCGAGATCGCCGCCGACGACTTCTTCACCGGCCTCTTCGAGACGGCGCTGGAGGACGGCGAGATCATCGTCGCGGTCACCTTCGAGACACCGGCAAGGGCGGCCTATGCCAAATTCCCCAACCCCGCCTCGCGCTACGCCATGGCAGGCGTCTTCGTGGCGAAGGCATGGGACGGGAGCGTGCGGGCGGCGGTGACGGGCGCAGGCTCCAACGGCGTCTTCCGCCATGCCGGCCTGGAGGCGGCGCTTTCCGCCAACTGGTCGGCGGACGCCGCGTCAGGCATCACGGTCGATGCGGCGGACATGCTCTCGGATATCCACGGCAGCGCCGAATACCGCGCGAACCTGGTGAAGGTCATGGCCAAGCGCGCGGTCGCCGCCGCCTGA
PROTEIN sequence
Length: 266
MYATNYHRASSLADAARLQSSSDEAKYVSGGMTLIPTMKQRLAAPSDLVDLRHVPELKGISVSGNRVRIGAGTTHHEVSTSAELKAVCPAICHLASHIGDPHVRHMGTIGGSIANNDPAADYPSAMLALGATIVTDRREIAADDFFTGLFETALEDGEIIVAVTFETPARAAYAKFPNPASRYAMAGVFVAKAWDGSVRAAVTGAGSNGVFRHAGLEAALSANWSADAASGITVDAADMLSDIHGSAEYRANLVKVMAKRAVAAA*