ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8565_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(6286..7500)

Top 3 Functional Annotations

Value Algorithm Source
5-aminolevulinate synthase HemA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXY5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 404.0
  • Bit_score: 792
  • Evalue 1.50e-226
  • rbh
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:0000256|RuleBase:RU910713}; Delta-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 404.0
  • Bit_score: 792
  • Evalue 2.20e-226
5-aminolevulinate synthase; K00643 5-aminolevulinate synthase [EC:2.3.1.37] similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 404.0
  • Bit_score: 757
  • Evalue 1.70e-216
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGGACTTCGAGACCTACTTCAAGAACGAACTGGACGGCCTGCATCAGGAAGGCCGCTATCGCATCTTCGCCGACCTGGAGCGCCAGAAGGGCAACTTCCCGAAGGCGACCCGCTATACGGCGGAAGGTCCCAAGGACGTCACGGTCTGGTGCTCCAACGACTATCTCGGCATGGGTCAGCATCCGACCGTCACCGAAGCCATGAAGCGCGCCATCGACCAGTGCGGCGCCGGCGCCGGCGGCACCCGCAACATCTCCGGCACGAATCACTACCATGTGCTCCTGGAGCAGGAACTCGCCGACCTGCACGGCAAGGAATCGGCCCTGCTCTTCACCTCCGGCTACGTCTCCAACTGGGCCGCGCTCGGCACGCTCTGTTCCAGGATCCCCGGCATCATCTGTTTCTCCGATGCCGGCAACCACGCCTCGATGATCGAGGGCATCCGCCACTCCAAGTGCGAGCGCGTGATCTGGAAGCACAATGATCTCAAGGATCTCGAAGCCAAGCTCGCGAGCGCCGATCCGAAAGCGCCGAAGCTGATCGCCTTCGAATCGGTCTATTCGATGGACGGCGACATCGCCCCCATCAAGGAGATCTGCGACCTCGCCGACAAGTACGGCGCGATGACCTATCTCGACGAAGTCCACGCTGTCGGCATGTACGGCCCGCGCGGCGGCGGCATTGCCGAACGCGAAGGCCTGATGCACCGGCTGACCGTCATCGAAGGCACGCTCGGCAAGGCCTTCGGCGTCATGGGCGGCTATATCACCGGCTCCGCCGCGCTCTGCGACTTCGTGCGCTCCTTCGCTTCCGGCTTCATCTTCACGACGGCCCTGCCGCCGACGCTCGCCGCCGGCGCCCTCGCCTCGATCCGCCACCTCAAGGAAAGTCAGGTCGAGCGCCTCGCCCATCAGGCGCGCGTGCGCAAGCTGCGTGCGCTTCTCGACCGCAACGGCATTCCGCATATGCCGAACCCGAGCCATATCGTGCCGGTCATGGTGGGTGACGCGGCCAAGTGCAAATGGATCTCGGACCTGCTGCTCGACAATTTCGGCGTCTATGTCCAGCCGATCAACTACCCGACCGTGCCGAAGAAGACCGAGCGCCTGCGCATCACGCCGACGCCGCTGCACACGGATGCCGACATCGAGCATCTCGTCGGCGCGCTGCATGCGCTCTGGTCGCGCTGCGCGCTCGCCCGCGCCGTCGCCTGA
PROTEIN sequence
Length: 405
MDFETYFKNELDGLHQEGRYRIFADLERQKGNFPKATRYTAEGPKDVTVWCSNDYLGMGQHPTVTEAMKRAIDQCGAGAGGTRNISGTNHYHVLLEQELADLHGKESALLFTSGYVSNWAALGTLCSRIPGIICFSDAGNHASMIEGIRHSKCERVIWKHNDLKDLEAKLASADPKAPKLIAFESVYSMDGDIAPIKEICDLADKYGAMTYLDEVHAVGMYGPRGGGIAEREGLMHRLTVIEGTLGKAFGVMGGYITGSAALCDFVRSFASGFIFTTALPPTLAAGALASIRHLKESQVERLAHQARVRKLRALLDRNGIPHMPNPSHIVPVMVGDAAKCKWISDLLLDNFGVYVQPINYPTVPKKTERLRITPTPLHTDADIEHLVGALHALWSRCALARAVA*