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SCNpilot_expt_1000_bf_scaffold_8565_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(10990..11481)

Top 3 Functional Annotations

Value Algorithm Source
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS {ECO:0000313|EMBL:EYR79607.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EYR79607.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 163.0
  • Bit_score: 314
  • Evalue 7.00e-83
coxS; putative carbon-monoxide dehydrogenase small subunit; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 163.0
  • Bit_score: 282
  • Evalue 6.60e-74
Putative carbon-monoxide dehydrogenase small subunit n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A1L0_RHIFH similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 163.0
  • Bit_score: 282
  • Evalue 2.10e-73

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGCGAAAGTGGCAATGACCGTCAACGGCAGGAAGGTGAGCAGGGAGTGCGAGGACCGCACGCTGCTCGTGCATTTCCTGCGCGACCAGCTCGCTCTTACCGGAACCCATGTCGGCTGCGATACGTCCCAGTGCGGGGCCTGCGTCGTGCATATGGACGGCAAGGCGGTGAAGAGCTGTTCCATCCTCGCGGCCCAGGCCGCGGGCTCGGAGATCCTCACCATCGAGGGCCTTGCCGCCAATGGCGAGCTGCATCCCGTGCAGGCCGCCTTCAAGGCCAATCACGGCCTGCAATGCGGTTTCTGTACGCCCGGCATGGTGATGACCGCGGTCGACATGATCGCCCGCTACGGCGGCGCGCTCGACGAGAAGACGGTGCGCGAGAACCTCGAAGGCAATATCTGTCGATGCACCGGCTACCACAACATCGTGAAAGCCATTCTCGCCGCCGCCGAGGACATGGGCGCGGCGGGCCGGCAGGCTGCGGAATAA
PROTEIN sequence
Length: 164
MAKVAMTVNGRKVSRECEDRTLLVHFLRDQLALTGTHVGCDTSQCGACVVHMDGKAVKSCSILAAQAAGSEILTIEGLAANGELHPVQAAFKANHGLQCGFCTPGMVMTAVDMIARYGGALDEKTVRENLEGNICRCTGYHNIVKAILAAAEDMGAAGRQAAE*