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SCNpilot_expt_1000_bf_scaffold_7544_curated_15

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 12749..13123

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZK0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 124.0
  • Bit_score: 222
  • Evalue 3.40e-55
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 124.0
  • Bit_score: 222
  • Evalue 4.70e-55
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 124.0
  • Bit_score: 208
  • Evalue 1.60e-51

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGTTCGCAGTCATCAAGACCGGCGGTAAGCAGTACCGCGTGGCCGCCAACGACGTCCTGACAATTGAAAAGCTGTCCGGCGAAGCTGGTGCGAAGATCGAATTCACCGAAGTGCTGATGGTCGGCGTCGGCGCCGATGCCACGATCGGTGCGCCCTTCGTCGAAGGCGCCGTCGTGACCGCCGAAGTCGTCGAGCATGGCCGTGGCAAGAAGGTCATCGCCTTCAAGAAGCGCCGCCGCCAGAACTCCAAGCGCTCGCGCGGCCATCGCCAGCACAACACGACTGTCCGCATCGTCGATATCGCGGCAGCCGGCGGCAAGGCAAAGAAGGCTTCCAAGAAGTCTGAAGCCGAAGCCGTTGCAGCAGCCGAATAA
PROTEIN sequence
Length: 125
MFAVIKTGGKQYRVAANDVLTIEKLSGEAGAKIEFTEVLMVGVGADATIGAPFVEGAVVTAEVVEHGRGKKVIAFKKRRRQNSKRSRGHRQHNTTVRIVDIAAAGGKAKKASKKSEAEAVAAAE*