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SCNpilot_expt_1000_bf_scaffold_7544_curated_16

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 13149..13418

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L27 n=1 Tax=Rhizobium sp. RepID=L0NKQ3_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 89.0
  • Bit_score: 180
  • Evalue 1.10e-42
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 89.0
  • Bit_score: 180
  • Evalue 1.50e-42
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 89.0
  • Bit_score: 177
  • Evalue 1.60e-42

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Taxonomy

Rhizobium sp. → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGCACACAAGAAAGCTGGCGGTTCCTCGCGCAACGGTCGCGATTCCCAGTCCAAGCGCCTCGGCGTGAAGAAGTTCGGCGGCGAAGCCGTCCTCGCAGGCAACATTATCGTGCGCCAGCGCGGCACGCAGTGGCATCCCGGCGCCAATGTCGGCCTCGGCAAGGATCACACGATCTTCGCCCTTACGGCCGGCAATGTGAATTTCCGTACGAAGGCCAACGGCCGCGTCTACGTGTCTGTAATGCCGAAAGCGGAAGCAGCGGAATAA
PROTEIN sequence
Length: 90
MAHKKAGGSSRNGRDSQSKRLGVKKFGGEAVLAGNIIVRQRGTQWHPGANVGLGKDHTIFALTAGNVNFRTKANGRVYVSVMPKAEAAE*