ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1731_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 7525..8463

Top 3 Functional Annotations

Value Algorithm Source
UPF0176 protein SHLA_31c00030 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZX7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 312.0
  • Bit_score: 578
  • Evalue 3.50e-162
  • rbh
UPF0176 protein SHLA_11c000740 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 312.0
  • Bit_score: 578
  • Evalue 5.00e-162
rhodanese-related sulfurtransferase; K07146 UPF0176 protein similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 312.0
  • Bit_score: 539
  • Evalue 7.50e-151
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGACAAACGAGATCTCTTCGCCCGCTGAGAACGGTGGCTTCCTGGTCGCCGCGCTCTATCATTTCGTCTCCGTTCCGCGCTTTGCCGAACTGCGCGCGCCGCTTCAGGCGCTCTGCGAGGAAAACGGCGTGCGCGGCACGCTGCTGCTCGCCCATGAGGGCATCAACGGCACGATCGCCGGGCCACACGCCGGTGTCCGCGCGGTGCTTTCCTTCCTGCGCAGCCAGCCGGAATTTGCCGCGCTGGAGCACAAGGAAAGCCGCGCGGGCGACATGCCGTTCCTCCGCATGAAGGTACGGCTCAAGAAGGAGATCGTCACCATGGGCGTCGAGGACATCGACCCCAACCGCTCCGTCGGCACCTATGTCGCGCCGAAGGACTGGAACGCGCTGATCTCCGATCCGGACACGATCGTCATCGACACGCGCAACGACTACGAGACGGCGATCGGCATCTTCAAGGGCGCGATCGATCCGAACACGAAGACCTTCCGCGAATTTCCCGGCTGGGTGCGCCGGAACACCGGCCTGCACAACAAGCCGAAGATCGCCATGTACTGCACCGGCGGCATCCGCTGCGAAAAGGCGACCGCCTTCATGAAGGCCGAGGGCTTCGACGAGGTCTACCACCTCAAGGGCGGCATCCTGAAATATCTGGAGGACGTGCCGCCGGAGGAAAGCCTGTGGGAGGGCGCCTGCTTCGTCTTCGACGAGCGCGTCTCCGTCACCCATGGCCTCGAGGAAGGCGAGCACAAGCTCTGCCGCGCCTGCCGCCACCCGCTGACCGCCGAGGAAATCGCCTCCCCGCTCTACGAGCCCGGCGTCTCCTGCCCGCACTGCCATGCGAGCCGCAGCGAGGAAGACCGCATGCGCTTCCGCCAGCGGCAGAAGCAGATGGACCTGGCGAAGAAGCGCGGCGAGCGTCATCTCGGGAAGTAG
PROTEIN sequence
Length: 313
MTNEISSPAENGGFLVAALYHFVSVPRFAELRAPLQALCEENGVRGTLLLAHEGINGTIAGPHAGVRAVLSFLRSQPEFAALEHKESRAGDMPFLRMKVRLKKEIVTMGVEDIDPNRSVGTYVAPKDWNALISDPDTIVIDTRNDYETAIGIFKGAIDPNTKTFREFPGWVRRNTGLHNKPKIAMYCTGGIRCEKATAFMKAEGFDEVYHLKGGILKYLEDVPPEESLWEGACFVFDERVSVTHGLEEGEHKLCRACRHPLTAEEIASPLYEPGVSCPHCHASRSEEDRMRFRQRQKQMDLAKKRGERHLGK*