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SCNpilot_expt_1000_bf_scaffold_1731_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 10050..10949

Top 3 Functional Annotations

Value Algorithm Source
Cyclic di-GMP phosphodiesterase response regulator RpfG {ECO:0000313|EMBL:EYR80572.1}; EC=3.1.4.52 {ECO:0000313|EMBL:EYR80572.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 300.0
  • Bit_score: 458
  • Evalue 5.50e-126
phosphohydrolase n=1 Tax=Rhizobium mongolense RepID=UPI0003B3D4DC similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 305.0
  • Bit_score: 335
  • Evalue 6.50e-89
  • rbh
metal-dependent phosphohydrolase protein similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 304.0
  • Bit_score: 233
  • Evalue 1.10e-58

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
GTGCAAAGGATCCCGAAACATCTCGTGCGAAAAGGCATGTTCATCGAGGCGATGGAATGCCCGAACGACGAGTTTTCCGGTCGCCGCTTCTACGTGCAATCCGACGAGATGCTGCGCGTGATCCTCGCGACATCGGCGGCCTACGCCCTGGTCAACACGCAGAAGAGCATGGTGGACGCGGGCGCGACGACGGATGCCGCATCCGGCAGGCAGGCCGAGGAGCGCAGGCGAACCCTTGAAGTCGTTTCACAGTCGGCGCACGCCCTGCGCGACGGTTTCGCGGCCGCCCGGTCCGGCCACTTCGAGGCCGAGACACTCGGACCGGTGGCCGACAATATTTCCGACCGCATCGAGGCGGACCCCGACGTCTTCCTGAAGGTCACGCGCCTGAAGACCAAGGACGAGGGCACCTATGTCCATTCGCTGGCGGTCAGCGCCCTCATGATGCGGCTTGCCCGCCTGCTGCACTATGACGAGGACGCGGTGCGCGAGCTTGGCGTGGCGGGCCTGCTGCACGATGTCGGCAAGCTCATGGTCCCGAACGCGGTCCTCAACAAGAACGGGGGCCTCGATACGGATGAAAAGCGCCTGATGCGCACCCACCCGGAGCTTGGATACCGGCTGCTGAAGGAACAGGACGGCATTTCCAGTACCATCCTCGATGTCTGCCGCCATCATCACGAAGCGCTCGACGGCAGCGGCTATCCGCTTGGCCTGAAAGCCGGTCAGATAAGCCGGGAGGTCCGCCTCGCCACCGTCTGCGACGTCTTCGAGGCCCTGACGAGCGCCCGCCCCTACAAGCGGCCGTGGGAAACGAGGGATGCACTGAACTGGATGTTCGAGCGCGGCCACCTGTTCGACAAGAGGCTGGTCATCCGCCTCGGCAGCATCTTCTCCTGA
PROTEIN sequence
Length: 300
VQRIPKHLVRKGMFIEAMECPNDEFSGRRFYVQSDEMLRVILATSAAYALVNTQKSMVDAGATTDAASGRQAEERRRTLEVVSQSAHALRDGFAAARSGHFEAETLGPVADNISDRIEADPDVFLKVTRLKTKDEGTYVHSLAVSALMMRLARLLHYDEDAVRELGVAGLLHDVGKLMVPNAVLNKNGGLDTDEKRLMRTHPELGYRLLKEQDGISSTILDVCRHHHEALDGSGYPLGLKAGQISREVRLATVCDVFEALTSARPYKRPWETRDALNWMFERGHLFDKRLVIRLGSIFS*