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SCNpilot_expt_1000_bf_scaffold_4153_curated_14

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 11246..11848

Top 3 Functional Annotations

Value Algorithm Source
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 200.0
  • Bit_score: 414
  • Evalue 1.00e-112
Superoxide dismutase n=1 Tax=Rhizobium sp. CF080 RepID=J2JFX2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 200.0
  • Bit_score: 388
  • Evalue 4.30e-105
  • rbh
sodB1; superoxide dismutase, iron/manganese cofactor (EC:1.15.1.1) similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 200.0
  • Bit_score: 384
  • Evalue 2.00e-104
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGGCTTTCGAACTTCCGCCGCTTCCCTACGATTACGACGCGCTCGCCCCCTTCATGTCGCGCGAGACGCTCGAATATCACCACGACAAGCACCACAAGGCCTATGTCGACAACGGCAACAAGCTGGCGGAGGAAGCAGGCCTTGCGAACCTCTCCCTCGAAGAGATCGTCAAGAAGTCCTACGGCACCAACCAGGGCCTCTTCAACAATGCCGGCCAGCACTACAACCATCTCCATTTCTGGAACTGGATGAAGAAGGGCGGCGGCGGCGAGAGCCTGCCGGGCGTGCTCCAGAAGGCCATCGACAGCGATCTGGGCGGCTATGACAAGTTCAAGGCCGATTTCGTCGCCGCCGGCACCACGCAGTTCGGCTCGGGCTGGGCCTGGCTCTCCGTCAAGGACGGCAAGCTCGCCATCTCCAAGACCCCGAACGGCGAGAACCCGCTGGTCCACGGCGCGGAACCCATCCTCGGCGTCGACGTGTGGGAACACTCCTACTACATCGACTACCGCAACGCCCGCCCGAAATACCTCGAAGCCTTCGTCGACAGCCTGATCAACTGGGACTACGTCCTGGAGCGCTACGAAGCCGCAACGAAGTAA
PROTEIN sequence
Length: 201
MAFELPPLPYDYDALAPFMSRETLEYHHDKHHKAYVDNGNKLAEEAGLANLSLEEIVKKSYGTNQGLFNNAGQHYNHLHFWNWMKKGGGGESLPGVLQKAIDSDLGGYDKFKADFVAAGTTQFGSGWAWLSVKDGKLAISKTPNGENPLVHGAEPILGVDVWEHSYYIDYRNARPKYLEAFVDSLINWDYVLERYEAATK*