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SCNpilot_expt_1000_bf_scaffold_4153_curated_18

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 13448..14083

Top 3 Functional Annotations

Value Algorithm Source
Leucine efflux protein Rhtb n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX18_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 211.0
  • Bit_score: 379
  • Evalue 1.60e-102
  • rbh
Leucine efflux protein Rhtb {ECO:0000313|EMBL:EYR80782.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 211.0
  • Bit_score: 379
  • Evalue 2.30e-102
RhtB family transporter similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 209.0
  • Bit_score: 293
  • Evalue 6.30e-77

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGACCTACAGCGAAAACCTCTGGCTCTTCTTCCTGCTCGTCTCCGGCATCGTCATCGTGCCGGGCATGGACATGGTCTTCGTGCTGGCGAGCACGCTCTCCGGCGGCCGCAGGGCGGGGCTCTCGGCGACCTTCGGCATCATGGCAGGCGGGCTGGTGCACACGCTCTATGCCGCCCTCGGCGTCGGCATGCTGCTGCATTTCGCGCCGAAGCTCTTCAACGGGCTGCTGGTCGCCGGCGCGGCCTATGTCGCGTGGATCGGCTGGCAGCTCTTCCGCAGCTCCATCGTCATCGGCGACGTCGGCGATCTCGGCAGGCGCGGCCTTGCCACGCGCTTCCGCCAGGGCGCGCTGACCAGCCTCATGAACCCCAAGGCCTATCTCTTCATGCTCGCCGTCTTCCCGCAGTTCCTGCGCCCGGAATTCGGCCCCCTCTGGCGCCAGACGCTCGTCATGCTGCTGATGATCTGGGCGGCCCAGCTTGCCGTCTACGGCGGCCTCGCGCTCGCCGCTGCGCAAAGCCGCGACGCGCTGGTCGGCAGCCCCGCCGCCACCCGCCTCATCGGCCGCGCCGCGGGCGTGCTGCTCGTCATCATCGCGGCGGTCACGGTCTGGCGAGGCTGGGGGACGGTTTGA
PROTEIN sequence
Length: 212
MTYSENLWLFFLLVSGIVIVPGMDMVFVLASTLSGGRRAGLSATFGIMAGGLVHTLYAALGVGMLLHFAPKLFNGLLVAGAAYVAWIGWQLFRSSIVIGDVGDLGRRGLATRFRQGALTSLMNPKAYLFMLAVFPQFLRPEFGPLWRQTLVMLLMIWAAQLAVYGGLALAAAQSRDALVGSPAATRLIGRAAGVLLVIIAAVTVWRGWGTV*