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SCNpilot_expt_1000_bf_scaffold_4153_curated_23

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(17074..17658)

Top 3 Functional Annotations

Value Algorithm Source
ThiJ/PfpI family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EPW0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 192.0
  • Bit_score: 312
  • Evalue 2.90e-82
  • rbh
ThiJ/PfpI family protein {ECO:0000313|EMBL:EYR80779.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 192.0
  • Bit_score: 312
  • Evalue 4.10e-82
ThiJ/PfpI family protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 190.0
  • Bit_score: 170
  • Evalue 7.40e-40

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGACGAAGCGACTGGCAATCGTGCTGACGGAAGGCTACGCGGACTGGGAATGCGCCCTGCTGATGGCGACGGCCCGCGGCGACTGCGGGGCGGAGACCCTGGTGCTGACACCGGGCGGGGCGGACGTCACCTCGCTCGGCGGCGTCACCGTCAAAGCCGCCGGGGAGGCGCAAGCGGCCCTGCCCGCCGATTTCGACGCGCTGGTCGTCTGCGGCGGCACGATCTGGCAATCCGGCGCGGCGCCCGATCTTTCGGGCCCGATCGGGCGTTTCGTCGAGGCCGGCAAGCCGGTGGCGGCGATCTGCGACGCCACGCTGGAGCTCGCCCGCCTCGGCCTTCTCGATACGCGGGCGCATACCGGCAACTATTCCGGACAGCTCGGCAAGCTCGTGCCGGACTATCGCGGCGCGGCGCACTACCGCGACCAGCCGCAGGCGGTGCTGGACGGCGGCATCATCACCGCCTCCGGCGCGGCGCCGGCCACCTTCGCCCGCGAAATCCTGGAGGCCATCGGGCTCGGCTCCGCGGAGCTGCGGGGTTATCTGGCGATGTACGGGGATGAGCATCGGGCGGCGAAGGGCTGA
PROTEIN sequence
Length: 195
MTKRLAIVLTEGYADWECALLMATARGDCGAETLVLTPGGADVTSLGGVTVKAAGEAQAALPADFDALVVCGGTIWQSGAAPDLSGPIGRFVEAGKPVAAICDATLELARLGLLDTRAHTGNYSGQLGKLVPDYRGAAHYRDQPQAVLDGGIITASGAAPATFAREILEAIGLGSAELRGYLAMYGDEHRAAKG*