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SCNpilot_expt_1000_bf_scaffold_4153_curated_27

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(20955..21149)

Top 3 Functional Annotations

Value Algorithm Source
Quinoprotein glucose dehydrogenase Gdh {ECO:0000313|EMBL:EYR80775.1}; EC=1.1.5.2 {ECO:0000313|EMBL:EYR80775.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 64.0
  • Bit_score: 130
  • Evalue 9.70e-28
gdh; quinoprotein glucose dehydrogenase (EC:1.1.5.2) similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 64.0
  • Bit_score: 128
  • Evalue 8.20e-28
Probabable glucose dehydrogenase (Pyrroloquinoline-quinone) protein n=1 Tax=Sinorhizobium meliloti (strain SM11) RepID=F7WZX6_SINMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 64.0
  • Bit_score: 128
  • Evalue 2.60e-27

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 195
GTGGACGACTATCTGCGCGCCTATGACGTGACGACCGGCCGCCAGCTCTGGGAAGCCCGCCTTCCCGCCGGCGGACAGGCAACGCCGATGACCTACACGGTCGGCGACAAGCAATATGTGCTGATCGTCGCCGGCGGCCACGGCTCGGTGGGCACGAAGCCGGGGGACTACGTGATCGCCTATACGCTGCCGTAA
PROTEIN sequence
Length: 65
VDDYLRAYDVTTGRQLWEARLPAGGQATPMTYTVGDKQYVLIVAGGHGSVGTKPGDYVIAYTLP*