ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4659_curated_20

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 21206..21868

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:AID28520.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 217.0
  • Bit_score: 190
  • Evalue 3.50e-45
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 214.0
  • Bit_score: 189
  • Evalue 1.30e-45
Transcriptional regulator n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KRC5_MESAW similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 214.0
  • Bit_score: 189
  • Evalue 4.30e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGACCAAAATCGAGCGGGAACCGCTGAGTGACAGGGCTTACGGCGAAATCCTCAAGGGCATGTCCGACGGGACCTTCGCGCCGATGCAGCCCATGGTCATCCGCAACCTTGCCGACAGTTTCGGGATTTCCGCAACGCCGATCCGCGAGGCGCTGCAGCGGCTGGTCGCCGAGCGGCTGCTCGTCCAGTTGCCCAACCGCCAGATCGTCGTTCCGCAGATGACGGTCGAGCGCTTCAACCATCTCCTGCCGATGCGCGTGGCGCTGGAGGGCATGGCCGCCGAGCTGGCGACGCCCCTCTTCACCGACGAGGATTTCGTCCGGATGGAAGCGCTGATCGGCCGGATCGCCGAGACCACGCTGACCTTCGATGCCCGCGCCTACCTGAAGCTGAACCGGGAGTTCCATTTCAGCATCTACGAGAAGTCGGGCAATCCCGAGCTTCTTCTCGTCATCCAGGGGCTCTGGCTGAAGGTCGGCCCGGTCTTTAACGGCCTGTTCGACGCCGACCATTACCGCGAGCATGCCAATGACGAGCACCGCAACATCCTGGCGGCGATGAAGCGCCGGGACGCCGTCGCGGCGCGCGAGGCGATGGCCGACGACCTGAAACTGGCCGCCAAGGCATTGCTGCCGCGCCTCCTGCGCACGCCGGCGGACTGA
PROTEIN sequence
Length: 221
MTKIEREPLSDRAYGEILKGMSDGTFAPMQPMVIRNLADSFGISATPIREALQRLVAERLLVQLPNRQIVVPQMTVERFNHLLPMRVALEGMAAELATPLFTDEDFVRMEALIGRIAETTLTFDARAYLKLNREFHFSIYEKSGNPELLLVIQGLWLKVGPVFNGLFDADHYREHANDEHRNILAAMKRRDAVAAREAMADDLKLAAKALLPRLLRTPAD*